Thu Oct 4 21:20:30 PDT 2007 **Summary Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene Sensitivity 49.93% Gene Specificity 6.85% Transcript Sensitivity 45.36% Transcript Specificity 6.85% Exon Sensitivity 88.84% Exon Specificity 15.25% Nucleotide Sensitivity 95.27% Nucleotide Specificity 14.06% **General Stats** Predictions: ann_list.txt pred_list.txt Gene All Count 1344.00 10972.00 Total Transcripts 1669.00 10972.00 Transcripts Per 1.24 1.00 Transcript All Count 1669.00 10972.00 Average Length 20403.91 12582.57 Median Length 10902.00 6395.00 Total Length 34054123.00 138055995.00 Average Coding Length 1190.46 1203.95 Median Coding Length 1005.00 840.00 Total Coding Length 1986878.00 13209685.00 Average Score 0.00 6.55 Total Score 0.00 71894.22 Ave Exons Per 7.78 6.76 Med Exons Per 6.00 4.00 Total Exons 12991.00 74116.00 Complete Count 1588.00 10618.00 Average Length 20451.61 12489.43 Median Length 11003.00 6366.00 Total Length 32477150.00 132612764.00 Average Coding Length 1210.20 1199.13 Median Coding Length 1017.00 846.00 Total Coding Length 1921797.00 12732414.00 Average Score 0.00 6.52 Total Score 0.00 69239.53 Ave Exons Per 7.92 6.72 Med Exons Per 7.00 4.00 Total Exons 12581.00 71373.00 Incomplete Count 81.00 354.00 Average Length 19468.80 15376.36 Median Length 7680.00 7599.00 Total Length 1576973.00 5443231.00 Average Coding Length 803.47 1348.22 Median Coding Length 623.00 690.00 Total Coding Length 65081.00 477271.00 Average Score 0.00 7.50 Total Score 0.00 2654.68 Ave Exons Per 5.06 7.75 Med Exons Per 4.00 4.00 Total Exons 410.00 2743.00 Single Exon Count 133.00 1769.00 Average Length 7561.90 650.41 Median Length 1601.00 432.00 Total Length 1005733.00 1150575.00 Average Coding Length 1003.74 647.41 Median Coding Length 981.00 429.00 Total Coding Length 133497.00 1145268.00 Average Score 0.00 0.93 Total Score 0.00 1638.94 Ave Exons Per 1.00 1.00 Med Exons Per 1.00 1.00 Total Exons 133.00 1769.00 Exon All Count 12720.00 74116.00 Average Length 153.47 178.23 Median Length 119.00 123.00 Total Length 1952161.00 13209685.00 Average Score 0.00 0.97 Total Score 0.00 71894.22 Initial Count 1470.00 8988.00 Average Length 155.18 198.89 Median Length 102.00 92.00 Total Length 228116.00 1787599.00 Average Score 0.00 0.93 Total Score 0.00 8376.98 Internal Count 9652.00 54295.00 Average Length 132.90 150.87 Median Length 118.00 123.00 Total Length 1282726.00 8191618.00 Average Score 0.00 0.98 Total Score 0.00 53370.79 Terminal Count 1468.00 9064.00 Average Length 211.44 230.05 Median Length 136.00 129.00 Total Length 310390.00 2085200.00 Average Score 0.00 0.94 Total Score 0.00 8507.51 Single Count 130.00 1769.00 Average Length 1007.15 647.41 Median Length 981.00 429.00 Total Length 130929.00 1145268.00 Average Score 0.00 0.93 Total Score 0.00 1638.94 UTR3 Count 1618.00 0.00 Average Length 528.81 0.00 Median Length 388.00 0.00 Total Length 855622.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 UTR5 Count 2130.00 0.00 Average Length 101.22 0.00 Median Length 71.00 0.00 Total Length 215589.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Intron Count 11080.00 63144.00 Average Length 2397.41 1976.65 Median Length 927.00 1071.00 Total Length 26563292.00 124813811.00 Average Score 0.00 0.00 Total Score 0.00 0.00 InframeOptional Count 2.00 0.00 Average Length 85.50 0.00 Median Length 123.00 0.00 Total Length 171.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 FrameshiftOptional Count 0.00 0.00 Average Length 0.00 0.00 Median Length 0.00 0.00 Total Length 0.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Nuc All Count 1949219.00 13209685.00 Initial Count 227320.00 1787599.00 Internal Count 1282394.00 8191618.00 Terminal Count 310281.00 2085200.00 Single Count 130929.00 1145268.00 UTR3 Count 846970.00 0.00 UTR5 Count 212439.00 0.00 Intron Count 26408674.00 124813811.00 InframeOptional Count 171.00 0.00 FrameshiftOptional Count 0.00 0.00 Signal Splice Acceptor Count 11120.00 63359.00 Splice Donor Count 11122.00 63283.00 Start Codon Count 1626.00 10757.00 Stop Codon Count 1627.00 10833.00 **Detailed Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene All Count 10972.00 Ann Count 1344.00 Total Transcripts 10972.00 Transcripts Per 1.00 Consistent Pred Count 752.00 Consistent Ann Count 671.00 Consistent Specificity 6.85% Consistent Sensitivity 49.93% Exact Pred Count 741.00 Exact Ann Count 661.00 Exact Specificity 6.75% Exact Sensitivity 49.18% Full Exact Pred Count 15.00 Full Exact Ann Count 15.00 Full Exact Specificity 0.14% Full Exact Sensitivity 1.12% Genomic Overlap Pred Count 1824.00 Genomic Overlap Ann Count 1315.00 Genomic Overlap Specificity 16.62% Genomic Overlap Sensitivity 97.84% CDS Overlap Pred Count 1733.00 CDS Overlap Ann Count 1314.00 CDS Overlap Specificity 15.79% CDS Overlap Sensitivity 97.77% All Introns Pred Count 713.00 All Introns Ann Count 642.00 All Introns Specificity 6.50% All Introns Sensitivity 47.77% Exact UTR5 Pred Count 42.00 Exact UTR5 Ann Count 40.00 Exact UTR5 Specificity 0.38% Exact UTR5 Sensitivity 2.98% Exact UTR3 Pred Count 64.00 Exact UTR3 Ann Count 51.00 Exact UTR3 Specificity 0.58% Exact UTR3 Sensitivity 3.79% Exact Intron Pred Count 1490.00 Exact Intron Ann Count 1190.00 Exact Intron Specificity 13.58% Exact Intron Sensitivity 88.54% Exact Exon Pred Count 1656.00 Exact Exon Ann Count 1277.00 Exact Exon Specificity 15.09% Exact Exon Sensitivity 95.01% Start Codon Pred Count 1181.00 Start Codon Ann Count 1010.00 Start Codon Specificity 10.76% Start Codon Sensitivity 75.15% Stop Codon Pred Count 1335.00 Stop Codon Ann Count 1127.00 Stop Codon Specificity 12.17% Stop Codon Sensitivity 83.85% Start Stop Pred Count 914.00 Start Stop Ann Count 800.00 Start Stop Specificity 8.33% Start Stop Sensitivity 59.52% Transcript All Count 10972.00 Ann Count 1669.00 Average Length 12582.57 Median Length 6395.00 Total Length 138055995.00 Average Coding Length 1203.95 Median Coding Length 840.00 Total Coding Length 13209685.00 Average Score 6.55 Total Score 71894.22 Ave Exons Per 6.76 Med Exons Per 4.00 Total Exons 74116.00 Consistent Pred Count 752.00 Consistent Ann Count 757.00 Consistent Specificity 6.85% Consistent Sensitivity 45.36% Exact Pred Count 741.00 Exact Ann Count 746.00 Exact Specificity 6.75% Exact Sensitivity 44.70% Full Exact Pred Count 15.00 Full Exact Ann Count 15.00 Full Exact Specificity 0.14% Full Exact Sensitivity 0.90% Genomic Overlap Pred Count 1824.00 Genomic Overlap Ann Count 1630.00 Genomic Overlap Specificity 16.62% Genomic Overlap Sensitivity 97.66% CDS Overlap Pred Count 1733.00 CDS Overlap Ann Count 1629.00 CDS Overlap Specificity 15.79% CDS Overlap Sensitivity 97.60% All Introns Pred Count 713.00 All Introns Ann Count 719.00 All Introns Specificity 6.50% All Introns Sensitivity 43.08% Exact UTR5 Pred Count 42.00 Exact UTR5 Ann Count 42.00 Exact UTR5 Specificity 0.38% Exact UTR5 Sensitivity 2.52% Exact UTR3 Pred Count 64.00 Exact UTR3 Ann Count 64.00 Exact UTR3 Specificity 0.58% Exact UTR3 Sensitivity 3.83% Exact Intron Pred Count 1490.00 Exact Intron Ann Count 1455.00 Exact Intron Specificity 13.58% Exact Intron Sensitivity 87.18% Exact Exon Pred Count 1656.00 Exact Exon Ann Count 1574.00 Exact Exon Specificity 15.09% Exact Exon Sensitivity 94.31% Start Codon Pred Count 1181.00 Start Codon Ann Count 1195.00 Start Codon Specificity 10.76% Start Codon Sensitivity 71.60% Stop Codon Pred Count 1335.00 Stop Codon Ann Count 1353.00 Stop Codon Specificity 12.17% Stop Codon Sensitivity 81.07% Start Stop Pred Count 914.00 Start Stop Ann Count 921.00 Start Stop Specificity 8.33% Start Stop Sensitivity 55.18% Complete Count 10618.00 Ann Count 1588.00 Average Length 12489.43 Median Length 6366.00 Total Length 132612764.00 Average Coding Length 1199.13 Median Coding Length 846.00 Total Coding Length 12732414.00 Average Score 6.52 Total Score 69239.53 Ave Exons Per 6.72 Med Exons Per 4.00 Total Exons 71373.00 Consistent Pred Count 727.00 Consistent Ann Count 723.00 Consistent Specificity 6.85% Consistent Sensitivity 45.53% Exact Pred Count 719.00 Exact Ann Count 723.00 Exact Specificity 6.77% Exact Sensitivity 45.53% Full Exact Pred Count 15.00 Full Exact Ann Count 15.00 Full Exact Specificity 0.14% Full Exact Sensitivity 0.94% Genomic Overlap Pred Count 1777.00 Genomic Overlap Ann Count 1558.00 Genomic Overlap Specificity 16.74% Genomic Overlap Sensitivity 98.11% CDS Overlap Pred Count 1686.00 CDS Overlap Ann Count 1557.00 CDS Overlap Specificity 15.88% CDS Overlap Sensitivity 98.05% All Introns Pred Count 697.00 All Introns Ann Count 690.00 All Introns Specificity 6.56% All Introns Sensitivity 43.45% Exact UTR5 Pred Count 42.00 Exact UTR5 Ann Count 41.00 Exact UTR5 Specificity 0.40% Exact UTR5 Sensitivity 2.58% Exact UTR3 Pred Count 63.00 Exact UTR3 Ann Count 61.00 Exact UTR3 Specificity 0.59% Exact UTR3 Sensitivity 3.84% Exact Intron Pred Count 1455.00 Exact Intron Ann Count 1401.00 Exact Intron Specificity 13.70% Exact Intron Sensitivity 88.22% Exact Exon Pred Count 1612.00 Exact Exon Ann Count 1506.00 Exact Exon Specificity 15.18% Exact Exon Sensitivity 94.84% Start Codon Pred Count 1166.00 Start Codon Ann Count 1168.00 Start Codon Specificity 10.98% Start Codon Sensitivity 73.55% Stop Codon Pred Count 1315.00 Stop Codon Ann Count 1318.00 Stop Codon Specificity 12.38% Stop Codon Sensitivity 83.00% Start Stop Pred Count 914.00 Start Stop Ann Count 921.00 Start Stop Specificity 8.61% Start Stop Sensitivity 58.00% Incomplete Count 354.00 Ann Count 81.00 Average Length 15376.36 Median Length 7599.00 Total Length 5443231.00 Average Coding Length 1348.22 Median Coding Length 690.00 Total Coding Length 477271.00 Average Score 7.50 Total Score 2654.68 Ave Exons Per 7.75 Med Exons Per 4.00 Total Exons 2743.00 Consistent Pred Count 25.00 Consistent Ann Count 34.00 Consistent Specificity 7.06% Consistent Sensitivity 41.98% Exact Pred Count 22.00 Exact Ann Count 23.00 Exact Specificity 6.21% Exact Sensitivity 28.40% Full Exact Pred Count 0.00 Full Exact Ann Count 0.00 Full Exact Specificity 0.00% Full Exact Sensitivity 0.00% Genomic Overlap Pred Count 47.00 Genomic Overlap Ann Count 72.00 Genomic Overlap Specificity 13.28% Genomic Overlap Sensitivity 88.89% CDS Overlap Pred Count 47.00 CDS Overlap Ann Count 72.00 CDS Overlap Specificity 13.28% CDS Overlap Sensitivity 88.89% All Introns Pred Count 16.00 All Introns Ann Count 29.00 All Introns Specificity 4.52% All Introns Sensitivity 35.80% Exact UTR5 Pred Count 0.00 Exact UTR5 Ann Count 1.00 Exact UTR5 Specificity 0.00% Exact UTR5 Sensitivity 1.23% Exact UTR3 Pred Count 1.00 Exact UTR3 Ann Count 3.00 Exact UTR3 Specificity 0.28% Exact UTR3 Sensitivity 3.70% Exact Intron Pred Count 35.00 Exact Intron Ann Count 54.00 Exact Intron Specificity 9.89% Exact Intron Sensitivity 66.67% Exact Exon Pred Count 44.00 Exact Exon Ann Count 68.00 Exact Exon Specificity 12.43% Exact Exon Sensitivity 83.95% Start Codon Pred Count 15.00 Start Codon Ann Count 27.00 Start Codon Specificity 4.24% Start Codon Sensitivity 33.33% Stop Codon Pred Count 20.00 Stop Codon Ann Count 35.00 Stop Codon Specificity 5.65% Stop Codon Sensitivity 43.21% Start Stop Pred Count 0.00 Start Stop Ann Count 0.00 Start Stop Specificity 0.00% Start Stop Sensitivity 0.00% Single Exon Count 1769.00 Ann Count 133.00 Average Length 650.41 Median Length 432.00 Total Length 1150575.00 Average Coding Length 647.41 Median Coding Length 429.00 Total Coding Length 1145268.00 Average Score 0.93 Total Score 1638.94 Ave Exons Per 1.00 Med Exons Per 1.00 Total Exons 1769.00 Consistent Pred Count 85.00 Consistent Ann Count 86.00 Consistent Specificity 4.80% Consistent Sensitivity 64.66% Exact Pred Count 85.00 Exact Ann Count 86.00 Exact Specificity 4.80% Exact Sensitivity 64.66% Full Exact Pred Count 9.00 Full Exact Ann Count 9.00 Full Exact Specificity 0.51% Full Exact Sensitivity 6.77% Genomic Overlap Pred Count 155.00 Genomic Overlap Ann Count 128.00 Genomic Overlap Specificity 8.76% Genomic Overlap Sensitivity 96.24% CDS Overlap Pred Count 129.00 CDS Overlap Ann Count 127.00 CDS Overlap Specificity 7.29% CDS Overlap Sensitivity 95.49% All Introns Pred Count 0.00 All Introns Ann Count 0.00 All Introns Specificity 0.00% All Introns Sensitivity 0.00% Exact UTR5 Pred Count 10.00 Exact UTR5 Ann Count 10.00 Exact UTR5 Specificity 0.57% Exact UTR5 Sensitivity 7.52% Exact UTR3 Pred Count 30.00 Exact UTR3 Ann Count 32.00 Exact UTR3 Specificity 1.70% Exact UTR3 Sensitivity 24.06% Exact Intron Pred Count 0.00 Exact Intron Ann Count 0.00 Exact Intron Specificity 0.00% Exact Intron Sensitivity 0.00% Exact Exon Pred Count 86.00 Exact Exon Ann Count 86.00 Exact Exon Specificity 4.86% Exact Exon Sensitivity 64.66% Start Codon Pred Count 94.00 Start Codon Ann Count 92.00 Start Codon Specificity 5.31% Start Codon Sensitivity 69.17% Stop Codon Pred Count 118.00 Stop Codon Ann Count 116.00 Stop Codon Specificity 6.67% Stop Codon Sensitivity 87.22% Start Stop Pred Count 85.00 Start Stop Ann Count 86.00 Start Stop Specificity 4.80% Start Stop Sensitivity 64.66% Exon All Count 74116.00 Ann Count 12720.00 Average Length 178.23 Median Length 123.00 Total Length 13209685.00 Average Score 0.97 Total Score 71894.22 Correct Pred Count 11301.00 Correct Ann Count 11301.00 Correct Specificity 15.25% Correct Sensitivity 88.84% Overlap Pred Count 12035.00 Overlap Ann Count 12056.00 Overlap Specificity 16.24% Overlap Sensitivity 94.78% Overlap 80p Pred Count 11735.00 Overlap 80p Ann Count 11744.00 Overlap 80p Specificity 15.83% Overlap 80p Sensitivity 92.33% Splice 5 Pred Count 11577.00 Splice 5 Ann Count 11585.00 Splice 5 Specificity 15.62% Splice 5 Sensitivity 91.08% Splice 3 Pred Count 11742.00 Splice 3 Ann Count 11751.00 Splice 3 Specificity 15.84% Splice 3 Sensitivity 92.38% Initial Count 8988.00 Ann Count 1470.00 Average Length 198.89 Median Length 92.00 Total Length 1787599.00 Average Score 0.93 Total Score 8376.98 Correct Pred Count 1080.00 Correct Ann Count 1089.00 Correct Specificity 12.02% Correct Sensitivity 74.08% Overlap Pred Count 1259.00 Overlap Ann Count 1288.00 Overlap Specificity 14.01% Overlap Sensitivity 87.62% Overlap 80p Pred Count 1171.00 Overlap 80p Ann Count 1185.00 Overlap 80p Specificity 13.03% Overlap 80p Sensitivity 80.61% Splice 5 Pred Count 1090.00 Splice 5 Ann Count 1104.00 Splice 5 Specificity 12.13% Splice 5 Sensitivity 75.10% Splice 3 Pred Count 1244.00 Splice 3 Ann Count 1265.00 Splice 3 Specificity 13.84% Splice 3 Sensitivity 86.05% Internal Count 54295.00 Ann Count 9652.00 Average Length 150.87 Median Length 123.00 Total Length 8191618.00 Average Score 0.98 Total Score 53370.79 Correct Pred Count 8943.00 Correct Ann Count 8934.00 Correct Specificity 16.47% Correct Sensitivity 92.56% Overlap Pred Count 9335.00 Overlap Ann Count 9317.00 Overlap Specificity 17.19% Overlap Sensitivity 96.53% Overlap 80p Pred Count 9172.00 Overlap 80p Ann Count 9172.00 Overlap 80p Specificity 16.89% Overlap 80p Sensitivity 95.03% Splice 5 Pred Count 9110.00 Splice 5 Ann Count 9100.00 Splice 5 Specificity 16.78% Splice 5 Sensitivity 94.28% Splice 3 Pred Count 9163.00 Splice 3 Ann Count 9151.00 Splice 3 Specificity 16.88% Splice 3 Sensitivity 94.81% Terminal Count 9064.00 Ann Count 1468.00 Average Length 230.05 Median Length 129.00 Total Length 2085200.00 Average Score 0.94 Total Score 8507.51 Correct Pred Count 1192.00 Correct Ann Count 1193.00 Correct Specificity 13.15% Correct Sensitivity 81.27% Overlap Pred Count 1312.00 Overlap Ann Count 1326.00 Overlap Specificity 14.47% Overlap Sensitivity 90.33% Overlap 80p Pred Count 1269.00 Overlap 80p Ann Count 1266.00 Overlap 80p Specificity 14.00% Overlap 80p Sensitivity 86.24% Splice 5 Pred Count 1282.00 Splice 5 Ann Count 1291.00 Splice 5 Specificity 14.14% Splice 5 Sensitivity 87.94% Splice 3 Pred Count 1217.00 Splice 3 Ann Count 1220.00 Splice 3 Specificity 13.43% Splice 3 Sensitivity 83.11% Single Count 1769.00 Ann Count 130.00 Average Length 647.41 Median Length 429.00 Total Length 1145268.00 Average Score 0.93 Total Score 1638.94 Correct Pred Count 86.00 Correct Ann Count 85.00 Correct Specificity 4.86% Correct Sensitivity 65.38% Overlap Pred Count 129.00 Overlap Ann Count 125.00 Overlap Specificity 7.29% Overlap Sensitivity 96.15% Overlap 80p Pred Count 123.00 Overlap 80p Ann Count 121.00 Overlap 80p Specificity 6.95% Overlap 80p Sensitivity 93.08% Splice 5 Pred Count 95.00 Splice 5 Ann Count 90.00 Splice 5 Specificity 5.37% Splice 5 Sensitivity 69.23% Splice 3 Pred Count 118.00 Splice 3 Ann Count 115.00 Splice 3 Specificity 6.67% Splice 3 Sensitivity 88.46% UTR3 Count 0.00 Ann Count 1618.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% UTR5 Count 0.00 Ann Count 2130.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Intron Count 63144.00 Ann Count 11080.00 Average Length 1976.65 Median Length 1071.00 Total Length 124813811.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 9771.00 Correct Ann Count 9771.00 Correct Specificity 15.47% Correct Sensitivity 88.19% Overlap Pred Count 11265.00 Overlap Ann Count 10843.00 Overlap Specificity 17.84% Overlap Sensitivity 97.86% Overlap 80p Pred Count 10042.00 Overlap 80p Ann Count 10044.00 Overlap 80p Specificity 15.90% Overlap 80p Sensitivity 90.65% Splice 5 Pred Count 10382.00 Splice 5 Ann Count 10387.00 Splice 5 Specificity 16.44% Splice 5 Sensitivity 93.75% Splice 3 Pred Count 10349.00 Splice 3 Ann Count 10353.00 Splice 3 Specificity 16.39% Splice 3 Sensitivity 93.44% InframeOptional Count 0.00 Ann Count 2.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 1.00 Correct Specificity 0.00% Correct Sensitivity 50.00% Overlap Pred Count 0.00 Overlap Ann Count 1.00 Overlap Specificity 0.00% Overlap Sensitivity 50.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 1.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 50.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 1.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 50.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 1.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 50.00% FrameshiftOptional Count 0.00 Ann Count 0.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Nuc All Count 13209685.00 Ann Count 1949219.00 Correct Pred Count 1856937.00 Correct Ann Count 1856937.00 Correct Specificity 14.06% Correct Sensitivity 95.27% Initial Count 1787599.00 Ann Count 227320.00 Correct Pred Count 212136.00 Correct Ann Count 212105.00 Correct Specificity 11.87% Correct Sensitivity 93.31% Internal Count 8191618.00 Ann Count 1282394.00 Correct Pred Count 1244598.00 Correct Ann Count 1238583.00 Correct Specificity 15.19% Correct Sensitivity 96.58% Terminal Count 2085200.00 Ann Count 310281.00 Correct Pred Count 288130.00 Correct Ann Count 289863.00 Correct Specificity 13.82% Correct Sensitivity 93.42% Single Count 1145268.00 Ann Count 130929.00 Correct Pred Count 112073.00 Correct Ann Count 118091.00 Correct Specificity 9.79% Correct Sensitivity 90.19% UTR3 Count 0.00 Ann Count 846970.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% UTR5 Count 0.00 Ann Count 212439.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Intron Count 124813811.00 Ann Count 26408674.00 Correct Pred Count 19933147.00 Correct Ann Count 19933147.00 Correct Specificity 15.97% Correct Sensitivity 75.48% InframeOptional Count 0.00 Ann Count 171.00 Correct Pred Count 0.00 Correct Ann Count 48.00 Correct Specificity 0.00% Correct Sensitivity 28.07% FrameshiftOptional Count 0.00 Ann Count 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Signal Splice Acceptor Count 63359.00 Ann Count 11120.00 Correct Pred Count 10392.00 Correct Ann Count 10391.00 Correct Specificity 16.40% Correct Sensitivity 93.44% Splice Donor Count 63283.00 Ann Count 11122.00 Correct Pred Count 10407.00 Correct Ann Count 10416.00 Correct Specificity 16.45% Correct Sensitivity 93.65% Start Codon Count 10757.00 Ann Count 1626.00 Correct Pred Count 1181.00 Correct Ann Count 1195.00 Correct Specificity 10.98% Correct Sensitivity 73.49% Stop Codon Count 10833.00 Ann Count 1627.00 Correct Pred Count 1335.00 Correct Ann Count 1353.00 Correct Specificity 12.32% Correct Sensitivity 83.16% Thu Oct 4 21:21:22 PDT 2007