Sun Oct 7 17:13:57 PDT 2007 **Summary Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene Sensitivity 42.86% Gene Specificity 6.05% Transcript Sensitivity 42.65% Transcript Specificity 6.05% Exon Sensitivity 89.35% Exon Specificity 11.19% Nucleotide Sensitivity 95.29% Nucleotide Specificity 10.88% **General Stats** Predictions: ann_list.txt pred_list.txt Gene All Count 630.00 4463.00 Total Transcripts 633.00 4463.00 Transcripts Per 1.00 1.00 Transcript All Count 633.00 4463.00 Average Length 23113.84 18537.76 Median Length 11816.00 9873.00 Total Length 14631058.00 82734043.00 Average Coding Length 1291.06 1596.04 Median Coding Length 1092.00 1143.00 Total Coding Length 817239.00 7123105.00 Average Score 0.00 9.76 Total Score 0.00 43550.73 Ave Exons Per 8.83 9.95 Med Exons Per 7.00 7.00 Total Exons 5590.00 44392.00 Complete Count 603.00 4267.00 Average Length 22635.20 18234.33 Median Length 11983.00 9811.00 Total Length 13649024.00 77805872.00 Average Coding Length 1319.56 1604.10 Median Coding Length 1131.00 1149.00 Total Coding Length 795696.00 6844683.00 Average Score 0.00 9.77 Total Score 0.00 41667.73 Ave Exons Per 9.02 9.95 Med Exons Per 7.00 7.00 Total Exons 5441.00 42461.00 Incomplete Count 30.00 196.00 Average Length 32734.47 25143.73 Median Length 6556.00 11086.00 Total Length 982034.00 4928171.00 Average Coding Length 718.10 1420.52 Median Coding Length 453.00 913.00 Total Coding Length 21543.00 278422.00 Average Score 0.00 9.61 Total Score 0.00 1883.00 Ave Exons Per 4.97 9.85 Med Exons Per 3.00 6.00 Total Exons 149.00 1931.00 Single Exon Count 36.00 322.00 Average Length 10722.64 894.09 Median Length 3287.00 744.00 Total Length 386015.00 287898.00 Average Coding Length 1023.50 891.09 Median Coding Length 990.00 741.00 Total Coding Length 36846.00 286932.00 Average Score 0.00 0.96 Total Score 0.00 308.65 Ave Exons Per 1.00 1.00 Med Exons Per 1.00 1.00 Total Exons 36.00 322.00 Exon All Count 5560.00 44392.00 Average Length 146.33 160.46 Median Length 120.00 123.00 Total Length 813619.00 7123105.00 Average Score 0.00 0.98 Total Score 0.00 43550.73 Initial Count 577.00 4015.00 Average Length 141.70 168.13 Median Length 100.00 97.00 Total Length 81761.00 675028.00 Average Score 0.00 0.94 Total Score 0.00 3778.15 Internal Count 4367.00 35984.00 Average Length 133.86 147.24 Median Length 121.00 123.00 Total Length 584558.00 5298345.00 Average Score 0.00 0.99 Total Score 0.00 35536.56 Terminal Count 580.00 4071.00 Average Length 190.44 211.94 Median Length 134.00 129.00 Total Length 110454.00 862800.00 Average Score 0.00 0.96 Total Score 0.00 3927.37 Single Count 36.00 322.00 Average Length 1023.50 891.09 Median Length 990.00 741.00 Total Length 36846.00 286932.00 Average Score 0.00 0.96 Total Score 0.00 308.65 UTR3 Count 657.00 0.00 Average Length 792.28 0.00 Median Length 486.00 0.00 Total Length 520528.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 UTR5 Count 855.00 0.00 Average Length 80.81 0.00 Median Length 54.00 0.00 Total Length 69094.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Intron Count 4932.00 39929.00 Average Length 2280.04 1893.30 Median Length 831.00 848.00 Total Length 11245156.00 75597759.00 Average Score 0.00 0.00 Total Score 0.00 0.00 InframeOptional Count 1.00 0.00 Average Length 84.00 0.00 Median Length 84.00 0.00 Total Length 84.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 FrameshiftOptional Count 0.00 0.00 Average Length 0.00 0.00 Median Length 0.00 0.00 Total Length 0.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Nuc All Count 813481.00 7123105.00 Initial Count 81761.00 675028.00 Internal Count 584558.00 5298345.00 Terminal Count 110454.00 862800.00 Single Count 36846.00 286932.00 UTR3 Count 520230.00 0.00 UTR5 Count 69052.00 0.00 Intron Count 11231234.00 75597759.00 InframeOptional Count 84.00 0.00 FrameshiftOptional Count 0.00 0.00 Signal Splice Acceptor Count 4947.00 40055.00 Splice Donor Count 4944.00 39999.00 Start Codon Count 616.00 4337.00 Stop Codon Count 618.00 4393.00 **Detailed Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene All Count 4463.00 Ann Count 630.00 Total Transcripts 4463.00 Transcripts Per 1.00 Consistent Pred Count 270.00 Consistent Ann Count 270.00 Consistent Specificity 6.05% Consistent Sensitivity 42.86% Exact Pred Count 268.00 Exact Ann Count 268.00 Exact Specificity 6.00% Exact Sensitivity 42.54% Full Exact Pred Count 7.00 Full Exact Ann Count 7.00 Full Exact Specificity 0.16% Full Exact Sensitivity 1.11% Genomic Overlap Pred Count 656.00 Genomic Overlap Ann Count 607.00 Genomic Overlap Specificity 14.70% Genomic Overlap Sensitivity 96.35% CDS Overlap Pred Count 646.00 CDS Overlap Ann Count 605.00 CDS Overlap Specificity 14.47% CDS Overlap Sensitivity 96.03% All Introns Pred Count 259.00 All Introns Ann Count 259.00 All Introns Specificity 5.80% All Introns Sensitivity 41.11% Exact UTR5 Pred Count 17.00 Exact UTR5 Ann Count 17.00 Exact UTR5 Specificity 0.38% Exact UTR5 Sensitivity 2.70% Exact UTR3 Pred Count 13.00 Exact UTR3 Ann Count 13.00 Exact UTR3 Specificity 0.29% Exact UTR3 Sensitivity 2.06% Exact Intron Pred Count 583.00 Exact Intron Ann Count 560.00 Exact Intron Specificity 13.06% Exact Intron Sensitivity 88.89% Exact Exon Pred Count 633.00 Exact Exon Ann Count 595.00 Exact Exon Specificity 14.18% Exact Exon Sensitivity 94.44% Start Codon Pred Count 418.00 Start Codon Ann Count 418.00 Start Codon Specificity 9.37% Start Codon Sensitivity 66.35% Stop Codon Pred Count 501.00 Stop Codon Ann Count 501.00 Stop Codon Specificity 11.23% Stop Codon Sensitivity 79.52% Start Stop Pred Count 334.00 Start Stop Ann Count 334.00 Start Stop Specificity 7.48% Start Stop Sensitivity 53.02% Transcript All Count 4463.00 Ann Count 633.00 Average Length 18537.76 Median Length 9873.00 Total Length 82734043.00 Average Coding Length 1596.04 Median Coding Length 1143.00 Total Coding Length 7123105.00 Average Score 9.76 Total Score 43550.73 Ave Exons Per 9.95 Med Exons Per 7.00 Total Exons 44392.00 Consistent Pred Count 270.00 Consistent Ann Count 270.00 Consistent Specificity 6.05% Consistent Sensitivity 42.65% Exact Pred Count 268.00 Exact Ann Count 268.00 Exact Specificity 6.00% Exact Sensitivity 42.34% Full Exact Pred Count 7.00 Full Exact Ann Count 7.00 Full Exact Specificity 0.16% Full Exact Sensitivity 1.11% Genomic Overlap Pred Count 656.00 Genomic Overlap Ann Count 610.00 Genomic Overlap Specificity 14.70% Genomic Overlap Sensitivity 96.37% CDS Overlap Pred Count 646.00 CDS Overlap Ann Count 608.00 CDS Overlap Specificity 14.47% CDS Overlap Sensitivity 96.05% All Introns Pred Count 259.00 All Introns Ann Count 259.00 All Introns Specificity 5.80% All Introns Sensitivity 40.92% Exact UTR5 Pred Count 17.00 Exact UTR5 Ann Count 17.00 Exact UTR5 Specificity 0.38% Exact UTR5 Sensitivity 2.69% Exact UTR3 Pred Count 13.00 Exact UTR3 Ann Count 13.00 Exact UTR3 Specificity 0.29% Exact UTR3 Sensitivity 2.05% Exact Intron Pred Count 583.00 Exact Intron Ann Count 563.00 Exact Intron Specificity 13.06% Exact Intron Sensitivity 88.94% Exact Exon Pred Count 633.00 Exact Exon Ann Count 598.00 Exact Exon Specificity 14.18% Exact Exon Sensitivity 94.47% Start Codon Pred Count 418.00 Start Codon Ann Count 419.00 Start Codon Specificity 9.37% Start Codon Sensitivity 66.19% Stop Codon Pred Count 501.00 Stop Codon Ann Count 503.00 Stop Codon Specificity 11.23% Stop Codon Sensitivity 79.46% Start Stop Pred Count 334.00 Start Stop Ann Count 335.00 Start Stop Specificity 7.48% Start Stop Sensitivity 52.92% Complete Count 4267.00 Ann Count 603.00 Average Length 18234.33 Median Length 9811.00 Total Length 77805872.00 Average Coding Length 1604.10 Median Coding Length 1149.00 Total Coding Length 6844683.00 Average Score 9.77 Total Score 41667.73 Ave Exons Per 9.95 Med Exons Per 7.00 Total Exons 42461.00 Consistent Pred Count 258.00 Consistent Ann Count 258.00 Consistent Specificity 6.05% Consistent Sensitivity 42.79% Exact Pred Count 258.00 Exact Ann Count 258.00 Exact Specificity 6.05% Exact Sensitivity 42.79% Full Exact Pred Count 7.00 Full Exact Ann Count 7.00 Full Exact Specificity 0.16% Full Exact Sensitivity 1.16% Genomic Overlap Pred Count 626.00 Genomic Overlap Ann Count 584.00 Genomic Overlap Specificity 14.67% Genomic Overlap Sensitivity 96.85% CDS Overlap Pred Count 617.00 CDS Overlap Ann Count 582.00 CDS Overlap Specificity 14.46% CDS Overlap Sensitivity 96.52% All Introns Pred Count 250.00 All Introns Ann Count 252.00 All Introns Specificity 5.86% All Introns Sensitivity 41.79% Exact UTR5 Pred Count 16.00 Exact UTR5 Ann Count 16.00 Exact UTR5 Specificity 0.37% Exact UTR5 Sensitivity 2.65% Exact UTR3 Pred Count 13.00 Exact UTR3 Ann Count 13.00 Exact UTR3 Specificity 0.30% Exact UTR3 Sensitivity 2.16% Exact Intron Pred Count 560.00 Exact Intron Ann Count 543.00 Exact Intron Specificity 13.12% Exact Intron Sensitivity 90.05% Exact Exon Pred Count 604.00 Exact Exon Ann Count 572.00 Exact Exon Specificity 14.16% Exact Exon Sensitivity 94.86% Start Codon Pred Count 409.00 Start Codon Ann Count 411.00 Start Codon Specificity 9.59% Start Codon Sensitivity 68.16% Stop Codon Pred Count 489.00 Stop Codon Ann Count 492.00 Stop Codon Specificity 11.46% Stop Codon Sensitivity 81.59% Start Stop Pred Count 334.00 Start Stop Ann Count 335.00 Start Stop Specificity 7.83% Start Stop Sensitivity 55.56% Incomplete Count 196.00 Ann Count 30.00 Average Length 25143.73 Median Length 11086.00 Total Length 4928171.00 Average Coding Length 1420.52 Median Coding Length 913.00 Total Coding Length 278422.00 Average Score 9.61 Total Score 1883.00 Ave Exons Per 9.85 Med Exons Per 6.00 Total Exons 1931.00 Consistent Pred Count 12.00 Consistent Ann Count 12.00 Consistent Specificity 6.12% Consistent Sensitivity 40.00% Exact Pred Count 10.00 Exact Ann Count 10.00 Exact Specificity 5.10% Exact Sensitivity 33.33% Full Exact Pred Count 0.00 Full Exact Ann Count 0.00 Full Exact Specificity 0.00% Full Exact Sensitivity 0.00% Genomic Overlap Pred Count 30.00 Genomic Overlap Ann Count 26.00 Genomic Overlap Specificity 15.31% Genomic Overlap Sensitivity 86.67% CDS Overlap Pred Count 29.00 CDS Overlap Ann Count 26.00 CDS Overlap Specificity 14.80% CDS Overlap Sensitivity 86.67% All Introns Pred Count 9.00 All Introns Ann Count 7.00 All Introns Specificity 4.59% All Introns Sensitivity 23.33% Exact UTR5 Pred Count 1.00 Exact UTR5 Ann Count 1.00 Exact UTR5 Specificity 0.51% Exact UTR5 Sensitivity 3.33% Exact UTR3 Pred Count 0.00 Exact UTR3 Ann Count 0.00 Exact UTR3 Specificity 0.00% Exact UTR3 Sensitivity 0.00% Exact Intron Pred Count 23.00 Exact Intron Ann Count 20.00 Exact Intron Specificity 11.73% Exact Intron Sensitivity 66.67% Exact Exon Pred Count 29.00 Exact Exon Ann Count 26.00 Exact Exon Specificity 14.80% Exact Exon Sensitivity 86.67% Start Codon Pred Count 9.00 Start Codon Ann Count 8.00 Start Codon Specificity 4.59% Start Codon Sensitivity 26.67% Stop Codon Pred Count 12.00 Stop Codon Ann Count 11.00 Stop Codon Specificity 6.12% Stop Codon Sensitivity 36.67% Start Stop Pred Count 0.00 Start Stop Ann Count 0.00 Start Stop Specificity 0.00% Start Stop Sensitivity 0.00% Single Exon Count 322.00 Ann Count 36.00 Average Length 894.09 Median Length 744.00 Total Length 287898.00 Average Coding Length 891.09 Median Coding Length 741.00 Total Coding Length 286932.00 Average Score 0.96 Total Score 308.65 Ave Exons Per 1.00 Med Exons Per 1.00 Total Exons 322.00 Consistent Pred Count 28.00 Consistent Ann Count 28.00 Consistent Specificity 8.70% Consistent Sensitivity 77.78% Exact Pred Count 28.00 Exact Ann Count 28.00 Exact Specificity 8.70% Exact Sensitivity 77.78% Full Exact Pred Count 4.00 Full Exact Ann Count 4.00 Full Exact Specificity 1.24% Full Exact Sensitivity 11.11% Genomic Overlap Pred Count 31.00 Genomic Overlap Ann Count 32.00 Genomic Overlap Specificity 9.63% Genomic Overlap Sensitivity 88.89% CDS Overlap Pred Count 30.00 CDS Overlap Ann Count 32.00 CDS Overlap Specificity 9.32% CDS Overlap Sensitivity 88.89% All Introns Pred Count 0.00 All Introns Ann Count 0.00 All Introns Specificity 0.00% All Introns Sensitivity 0.00% Exact UTR5 Pred Count 6.00 Exact UTR5 Ann Count 6.00 Exact UTR5 Specificity 1.86% Exact UTR5 Sensitivity 16.67% Exact UTR3 Pred Count 4.00 Exact UTR3 Ann Count 4.00 Exact UTR3 Specificity 1.24% Exact UTR3 Sensitivity 11.11% Exact Intron Pred Count 0.00 Exact Intron Ann Count 0.00 Exact Intron Specificity 0.00% Exact Intron Sensitivity 0.00% Exact Exon Pred Count 28.00 Exact Exon Ann Count 28.00 Exact Exon Specificity 8.70% Exact Exon Sensitivity 77.78% Start Codon Pred Count 28.00 Start Codon Ann Count 29.00 Start Codon Specificity 8.70% Start Codon Sensitivity 80.56% Stop Codon Pred Count 30.00 Stop Codon Ann Count 30.00 Stop Codon Specificity 9.32% Stop Codon Sensitivity 83.33% Start Stop Pred Count 28.00 Start Stop Ann Count 28.00 Start Stop Specificity 8.70% Start Stop Sensitivity 77.78% Exon All Count 44392.00 Ann Count 5560.00 Average Length 160.46 Median Length 123.00 Total Length 7123105.00 Average Score 0.98 Total Score 43550.73 Correct Pred Count 4968.00 Correct Ann Count 4968.00 Correct Specificity 11.19% Correct Sensitivity 89.35% Overlap Pred Count 5214.00 Overlap Ann Count 5226.00 Overlap Specificity 11.75% Overlap Sensitivity 93.99% Overlap 80p Pred Count 5088.00 Overlap 80p Ann Count 5089.00 Overlap 80p Specificity 11.46% Overlap 80p Sensitivity 91.53% Splice 5 Pred Count 5050.00 Splice 5 Ann Count 5051.00 Splice 5 Specificity 11.38% Splice 5 Sensitivity 90.85% Splice 3 Pred Count 5138.00 Splice 3 Ann Count 5138.00 Splice 3 Specificity 11.57% Splice 3 Sensitivity 92.41% Initial Count 4015.00 Ann Count 577.00 Average Length 168.13 Median Length 97.00 Total Length 675028.00 Average Score 0.94 Total Score 3778.15 Correct Pred Count 383.00 Correct Ann Count 385.00 Correct Specificity 9.54% Correct Sensitivity 66.72% Overlap Pred Count 460.00 Overlap Ann Count 486.00 Overlap Specificity 11.46% Overlap Sensitivity 84.23% Overlap 80p Pred Count 419.00 Overlap 80p Ann Count 429.00 Overlap 80p Specificity 10.44% Overlap 80p Sensitivity 74.35% Splice 5 Pred Count 390.00 Splice 5 Ann Count 391.00 Splice 5 Specificity 9.71% Splice 5 Sensitivity 67.76% Splice 3 Pred Count 454.00 Splice 3 Ann Count 478.00 Splice 3 Specificity 11.31% Splice 3 Sensitivity 82.84% Internal Count 35984.00 Ann Count 4367.00 Average Length 147.24 Median Length 123.00 Total Length 5298345.00 Average Score 0.99 Total Score 35536.56 Correct Pred Count 4093.00 Correct Ann Count 4091.00 Correct Specificity 11.37% Correct Sensitivity 93.68% Overlap Pred Count 4237.00 Overlap Ann Count 4198.00 Overlap Specificity 11.77% Overlap Sensitivity 96.13% Overlap 80p Pred Count 4159.00 Overlap 80p Ann Count 4140.00 Overlap 80p Specificity 11.56% Overlap 80p Sensitivity 94.80% Splice 5 Pred Count 4152.00 Splice 5 Ann Count 4128.00 Splice 5 Specificity 11.54% Splice 5 Sensitivity 94.53% Splice 3 Pred Count 4183.00 Splice 3 Ann Count 4159.00 Splice 3 Specificity 11.62% Splice 3 Sensitivity 95.24% Terminal Count 4071.00 Ann Count 580.00 Average Length 211.94 Median Length 129.00 Total Length 862800.00 Average Score 0.96 Total Score 3927.37 Correct Pred Count 464.00 Correct Ann Count 464.00 Correct Specificity 11.40% Correct Sensitivity 80.00% Overlap Pred Count 487.00 Overlap Ann Count 510.00 Overlap Specificity 11.96% Overlap Sensitivity 87.93% Overlap 80p Pred Count 480.00 Overlap 80p Ann Count 489.00 Overlap 80p Specificity 11.79% Overlap 80p Sensitivity 84.31% Splice 5 Pred Count 480.00 Splice 5 Ann Count 503.00 Splice 5 Specificity 11.79% Splice 5 Sensitivity 86.72% Splice 3 Pred Count 471.00 Splice 3 Ann Count 471.00 Splice 3 Specificity 11.57% Splice 3 Sensitivity 81.21% Single Count 322.00 Ann Count 36.00 Average Length 891.09 Median Length 741.00 Total Length 286932.00 Average Score 0.96 Total Score 308.65 Correct Pred Count 28.00 Correct Ann Count 28.00 Correct Specificity 8.70% Correct Sensitivity 77.78% Overlap Pred Count 30.00 Overlap Ann Count 32.00 Overlap Specificity 9.32% Overlap Sensitivity 88.89% Overlap 80p Pred Count 30.00 Overlap 80p Ann Count 31.00 Overlap 80p Specificity 9.32% Overlap 80p Sensitivity 86.11% Splice 5 Pred Count 28.00 Splice 5 Ann Count 29.00 Splice 5 Specificity 8.70% Splice 5 Sensitivity 80.56% Splice 3 Pred Count 30.00 Splice 3 Ann Count 30.00 Splice 3 Specificity 9.32% Splice 3 Sensitivity 83.33% UTR3 Count 0.00 Ann Count 657.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% UTR5 Count 0.00 Ann Count 855.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Intron Count 39929.00 Ann Count 4932.00 Average Length 1893.30 Median Length 848.00 Total Length 75597759.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 4349.00 Correct Ann Count 4349.00 Correct Specificity 10.89% Correct Sensitivity 88.18% Overlap Pred Count 4964.00 Overlap Ann Count 4821.00 Overlap Specificity 12.43% Overlap Sensitivity 97.75% Overlap 80p Pred Count 4426.00 Overlap 80p Ann Count 4426.00 Overlap 80p Specificity 11.08% Overlap 80p Sensitivity 89.74% Splice 5 Pred Count 4626.00 Splice 5 Ann Count 4627.00 Splice 5 Specificity 11.59% Splice 5 Sensitivity 93.82% Splice 3 Pred Count 4616.00 Splice 3 Ann Count 4617.00 Splice 3 Specificity 11.56% Splice 3 Sensitivity 93.61% InframeOptional Count 0.00 Ann Count 1.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 1.00 Correct Specificity 0.00% Correct Sensitivity 100.00% Overlap Pred Count 0.00 Overlap Ann Count 1.00 Overlap Specificity 0.00% Overlap Sensitivity 100.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 1.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 100.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 1.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 100.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 1.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 100.00% FrameshiftOptional Count 0.00 Ann Count 0.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Nuc All Count 7123105.00 Ann Count 813481.00 Correct Pred Count 775163.00 Correct Ann Count 775163.00 Correct Specificity 10.88% Correct Sensitivity 95.29% Initial Count 675028.00 Ann Count 81761.00 Correct Pred Count 71634.00 Correct Ann Count 73856.00 Correct Specificity 10.61% Correct Sensitivity 90.33% Internal Count 5298345.00 Ann Count 584558.00 Correct Pred Count 575399.00 Correct Ann Count 565996.00 Correct Specificity 10.86% Correct Sensitivity 96.82% Terminal Count 862800.00 Ann Count 110454.00 Correct Pred Count 97428.00 Correct Ann Count 103038.00 Correct Specificity 11.29% Correct Sensitivity 93.29% Single Count 286932.00 Ann Count 36846.00 Correct Pred Count 30702.00 Correct Ann Count 32411.00 Correct Specificity 10.70% Correct Sensitivity 87.96% UTR3 Count 0.00 Ann Count 520230.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% UTR5 Count 0.00 Ann Count 69052.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Intron Count 75597759.00 Ann Count 11231234.00 Correct Pred Count 8649985.00 Correct Ann Count 8649985.00 Correct Specificity 11.44% Correct Sensitivity 77.02% InframeOptional Count 0.00 Ann Count 84.00 Correct Pred Count 0.00 Correct Ann Count 84.00 Correct Specificity 0.00% Correct Sensitivity 100.00% FrameshiftOptional Count 0.00 Ann Count 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Signal Splice Acceptor Count 40055.00 Ann Count 4947.00 Correct Pred Count 4632.00 Correct Ann Count 4631.00 Correct Specificity 11.56% Correct Sensitivity 93.61% Splice Donor Count 39999.00 Ann Count 4944.00 Correct Pred Count 4637.00 Correct Ann Count 4637.00 Correct Specificity 11.59% Correct Sensitivity 93.79% Start Codon Count 4337.00 Ann Count 616.00 Correct Pred Count 418.00 Correct Ann Count 419.00 Correct Specificity 9.64% Correct Sensitivity 68.02% Stop Codon Count 4393.00 Ann Count 618.00 Correct Pred Count 501.00 Correct Ann Count 503.00 Correct Specificity 11.40% Correct Sensitivity 81.39% Sun Oct 7 17:14:26 PDT 2007