Thu Oct 4 22:12:02 PDT 2007 **Summary Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene Sensitivity 56.65% Gene Specificity 37.87% Transcript Sensitivity 55.05% Transcript Specificity 37.87% Exon Sensitivity 93.53% Exon Specificity 66.13% Nucleotide Sensitivity 97.54% Nucleotide Specificity 66.35% **General Stats** Predictions: ann_list.txt pred_list.txt Gene All Count 4441.00 6591.00 Total Transcripts 4572.00 6591.00 Transcripts Per 1.03 1.00 Transcript All Count 4572.00 6591.00 Average Length 44603.34 32722.52 Median Length 18068.00 12437.00 Total Length 203926471.00 215674148.00 Average Coding Length 1535.89 1388.70 Median Coding Length 1206.00 975.00 Total Coding Length 7022110.00 9152925.00 Average Score 0.00 7.78 Total Score 0.00 51289.66 Ave Exons Per 9.14 7.86 Med Exons Per 7.00 5.00 Total Exons 41793.00 51782.00 Complete Count 4171.00 6126.00 Average Length 40601.44 30883.13 Median Length 17424.00 12054.00 Total Length 169348604.00 189190059.00 Average Coding Length 1568.65 1398.35 Median Coding Length 1248.00 990.00 Total Coding Length 6542853.00 8566272.00 Average Score 0.00 7.78 Total Score 0.00 47673.33 Ave Exons Per 9.30 7.85 Med Exons Per 7.00 5.00 Total Exons 38787.00 48093.00 Incomplete Count 401.00 465.00 Average Length 86229.09 56955.03 Median Length 28822.00 25075.00 Total Length 34577867.00 26484089.00 Average Coding Length 1195.15 1261.62 Median Coding Length 706.00 764.00 Total Coding Length 479257.00 586653.00 Average Score 0.00 7.78 Total Score 0.00 3616.32 Ave Exons Per 7.50 7.93 Med Exons Per 4.00 5.00 Total Exons 3006.00 3689.00 Single Exon Count 419.00 1147.00 Average Length 1100.02 690.11 Median Length 972.00 492.00 Total Length 460908.00 791556.00 Average Coding Length 1097.02 687.11 Median Coding Length 969.00 489.00 Total Coding Length 459651.00 788115.00 Average Score 0.00 0.97 Total Score 0.00 1112.54 Ave Exons Per 1.00 1.00 Med Exons Per 1.00 1.00 Total Exons 419.00 1147.00 Exon All Count 36610.00 51782.00 Average Length 171.32 176.76 Median Length 124.00 124.00 Total Length 6272187.00 9152925.00 Average Score 0.00 0.99 Total Score 0.00 51289.66 Initial Count 3557.00 5195.00 Average Length 202.17 195.80 Median Length 109.00 102.00 Total Length 719127.00 1017192.00 Average Score 0.00 0.98 Total Score 0.00 5070.05 Internal Count 29035.00 40212.00 Average Length 144.39 150.68 Median Length 123.00 123.00 Total Length 4192313.00 6059118.00 Average Score 0.00 1.00 Total Score 0.00 40012.69 Terminal Count 3601.00 5228.00 Average Length 250.32 246.46 Median Length 141.00 136.00 Total Length 901408.00 1288500.00 Average Score 0.00 0.97 Total Score 0.00 5094.38 Single Count 419.00 1147.00 Average Length 1097.02 687.11 Median Length 969.00 489.00 Total Length 459651.00 788115.00 Average Score 0.00 0.97 Total Score 0.00 1112.54 UTR3 Count 0.00 0.00 Average Length 0.00 0.00 Median Length 0.00 0.00 Total Length 0.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 UTR5 Count 0.00 0.00 Average Length 0.00 0.00 Median Length 0.00 0.00 Total Length 0.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Intron Count 32689.00 45191.00 Average Length 5207.73 4569.54 Median Length 1604.00 1605.00 Total Length 170235640.00 206502098.00 Average Score 0.00 0.00 Total Score 0.00 0.00 InframeOptional Count 45.00 0.00 Average Length 155.60 0.00 Median Length 90.00 0.00 Total Length 7002.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 FrameshiftOptional Count 15.00 0.00 Average Length 138.93 0.00 Median Length 116.00 0.00 Total Length 2084.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Nuc All Count 6226624.00 9152925.00 Initial Count 715491.00 1017192.00 Internal Count 4185149.00 6059118.00 Terminal Count 898093.00 1288500.00 Single Count 459651.00 788115.00 UTR3 Count 0.00 0.00 UTR5 Count 0.00 0.00 Intron Count 165851160.00 206502098.00 InframeOptional Count 7002.00 0.00 FrameshiftOptional Count 2084.00 0.00 Signal Splice Acceptor Count 32636.00 45440.00 Splice Donor Count 32592.00 45407.00 Start Codon Count 4369.00 6342.00 Stop Codon Count 4374.00 6375.00 **Detailed Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene All Count 6591.00 Ann Count 4441.00 Total Transcripts 6591.00 Transcripts Per 1.00 Consistent Pred Count 2496.00 Consistent Ann Count 2516.00 Consistent Specificity 37.87% Consistent Sensitivity 56.65% Exact Pred Count 2458.00 Exact Ann Count 2471.00 Exact Specificity 37.29% Exact Sensitivity 55.64% Full Exact Pred Count 2293.00 Full Exact Ann Count 2293.00 Full Exact Specificity 34.79% Full Exact Sensitivity 51.63% Genomic Overlap Pred Count 4170.00 Genomic Overlap Ann Count 4340.00 Genomic Overlap Specificity 63.27% Genomic Overlap Sensitivity 97.73% CDS Overlap Pred Count 4132.00 CDS Overlap Ann Count 4334.00 CDS Overlap Specificity 62.69% CDS Overlap Sensitivity 97.59% All Introns Pred Count 2310.00 All Introns Ann Count 2329.00 All Introns Specificity 35.05% All Introns Sensitivity 52.44% Exact UTR5 Pred Count 3151.00 Exact UTR5 Ann Count 3403.00 Exact UTR5 Specificity 47.81% Exact UTR5 Sensitivity 76.63% Exact UTR3 Pred Count 3429.00 Exact UTR3 Ann Count 3694.00 Exact UTR3 Specificity 52.03% Exact UTR3 Sensitivity 83.18% Exact Intron Pred Count 3574.00 Exact Intron Ann Count 3855.00 Exact Intron Specificity 54.23% Exact Intron Sensitivity 86.80% Exact Exon Pred Count 4009.00 Exact Exon Ann Count 4220.00 Exact Exon Specificity 60.83% Exact Exon Sensitivity 95.02% Start Codon Pred Count 3151.00 Start Codon Ann Count 3403.00 Start Codon Specificity 47.81% Start Codon Sensitivity 76.63% Stop Codon Pred Count 3429.00 Stop Codon Ann Count 3694.00 Stop Codon Specificity 52.03% Stop Codon Sensitivity 83.18% Start Stop Pred Count 2655.00 Start Stop Ann Count 2771.00 Start Stop Specificity 40.28% Start Stop Sensitivity 62.40% Transcript All Count 6591.00 Ann Count 4572.00 Average Length 32722.52 Median Length 12437.00 Total Length 215674148.00 Average Coding Length 1388.70 Median Coding Length 975.00 Total Coding Length 9152925.00 Average Score 7.78 Total Score 51289.66 Ave Exons Per 7.86 Med Exons Per 5.00 Total Exons 51782.00 Consistent Pred Count 2496.00 Consistent Ann Count 2517.00 Consistent Specificity 37.87% Consistent Sensitivity 55.05% Exact Pred Count 2458.00 Exact Ann Count 2472.00 Exact Specificity 37.29% Exact Sensitivity 54.07% Full Exact Pred Count 2293.00 Full Exact Ann Count 2293.00 Full Exact Specificity 34.79% Full Exact Sensitivity 50.15% Genomic Overlap Pred Count 4170.00 Genomic Overlap Ann Count 4471.00 Genomic Overlap Specificity 63.27% Genomic Overlap Sensitivity 97.79% CDS Overlap Pred Count 4132.00 CDS Overlap Ann Count 4464.00 CDS Overlap Specificity 62.69% CDS Overlap Sensitivity 97.64% All Introns Pred Count 2310.00 All Introns Ann Count 2331.00 All Introns Specificity 35.05% All Introns Sensitivity 50.98% Exact UTR5 Pred Count 3151.00 Exact UTR5 Ann Count 3489.00 Exact UTR5 Specificity 47.81% Exact UTR5 Sensitivity 76.31% Exact UTR3 Pred Count 3429.00 Exact UTR3 Ann Count 3769.00 Exact UTR3 Specificity 52.03% Exact UTR3 Sensitivity 82.44% Exact Intron Pred Count 3574.00 Exact Intron Ann Count 3979.00 Exact Intron Specificity 54.23% Exact Intron Sensitivity 87.03% Exact Exon Pred Count 4009.00 Exact Exon Ann Count 4349.00 Exact Exon Specificity 60.83% Exact Exon Sensitivity 95.12% Start Codon Pred Count 3151.00 Start Codon Ann Count 3489.00 Start Codon Specificity 47.81% Start Codon Sensitivity 76.31% Stop Codon Pred Count 3429.00 Stop Codon Ann Count 3769.00 Stop Codon Specificity 52.03% Stop Codon Sensitivity 82.44% Start Stop Pred Count 2655.00 Start Stop Ann Count 2814.00 Start Stop Specificity 40.28% Start Stop Sensitivity 61.55% Complete Count 6126.00 Ann Count 4171.00 Average Length 30883.13 Median Length 12054.00 Total Length 189190059.00 Average Coding Length 1398.35 Median Coding Length 990.00 Total Coding Length 8566272.00 Average Score 7.78 Total Score 47673.33 Ave Exons Per 7.85 Med Exons Per 5.00 Total Exons 48093.00 Consistent Pred Count 2319.00 Consistent Ann Count 2293.00 Consistent Specificity 37.86% Consistent Sensitivity 54.97% Exact Pred Count 2293.00 Exact Ann Count 2293.00 Exact Specificity 37.43% Exact Sensitivity 54.97% Full Exact Pred Count 2293.00 Full Exact Ann Count 2293.00 Full Exact Specificity 37.43% Full Exact Sensitivity 54.97% Genomic Overlap Pred Count 3874.00 Genomic Overlap Ann Count 4088.00 Genomic Overlap Specificity 63.24% Genomic Overlap Sensitivity 98.01% CDS Overlap Pred Count 3839.00 CDS Overlap Ann Count 4085.00 CDS Overlap Specificity 62.67% CDS Overlap Sensitivity 97.94% All Introns Pred Count 2151.00 All Introns Ann Count 2146.00 All Introns Specificity 35.11% All Introns Sensitivity 51.45% Exact UTR5 Pred Count 3047.00 Exact UTR5 Ann Count 3351.00 Exact UTR5 Specificity 49.74% Exact UTR5 Sensitivity 80.34% Exact UTR3 Pred Count 3288.00 Exact UTR3 Ann Count 3590.00 Exact UTR3 Specificity 53.67% Exact UTR3 Sensitivity 86.07% Exact Intron Pred Count 3321.00 Exact Intron Ann Count 3670.00 Exact Intron Specificity 54.21% Exact Intron Sensitivity 87.99% Exact Exon Pred Count 3718.00 Exact Exon Ann Count 3979.00 Exact Exon Specificity 60.69% Exact Exon Sensitivity 95.40% Start Codon Pred Count 3047.00 Start Codon Ann Count 3351.00 Start Codon Specificity 49.74% Start Codon Sensitivity 80.34% Stop Codon Pred Count 3288.00 Stop Codon Ann Count 3590.00 Stop Codon Specificity 53.67% Stop Codon Sensitivity 86.07% Start Stop Pred Count 2655.00 Start Stop Ann Count 2814.00 Start Stop Specificity 43.34% Start Stop Sensitivity 67.47% Incomplete Count 465.00 Ann Count 401.00 Average Length 56955.03 Median Length 25075.00 Total Length 26484089.00 Average Coding Length 1261.62 Median Coding Length 764.00 Total Coding Length 586653.00 Average Score 7.78 Total Score 3616.32 Ave Exons Per 7.93 Med Exons Per 5.00 Total Exons 3689.00 Consistent Pred Count 177.00 Consistent Ann Count 224.00 Consistent Specificity 38.06% Consistent Sensitivity 55.86% Exact Pred Count 165.00 Exact Ann Count 179.00 Exact Specificity 35.48% Exact Sensitivity 44.64% Full Exact Pred Count 0.00 Full Exact Ann Count 0.00 Full Exact Specificity 0.00% Full Exact Sensitivity 0.00% Genomic Overlap Pred Count 296.00 Genomic Overlap Ann Count 383.00 Genomic Overlap Specificity 63.66% Genomic Overlap Sensitivity 95.51% CDS Overlap Pred Count 293.00 CDS Overlap Ann Count 379.00 CDS Overlap Specificity 63.01% CDS Overlap Sensitivity 94.51% All Introns Pred Count 159.00 All Introns Ann Count 185.00 All Introns Specificity 34.19% All Introns Sensitivity 46.13% Exact UTR5 Pred Count 104.00 Exact UTR5 Ann Count 138.00 Exact UTR5 Specificity 22.37% Exact UTR5 Sensitivity 34.41% Exact UTR3 Pred Count 141.00 Exact UTR3 Ann Count 179.00 Exact UTR3 Specificity 30.32% Exact UTR3 Sensitivity 44.64% Exact Intron Pred Count 253.00 Exact Intron Ann Count 309.00 Exact Intron Specificity 54.41% Exact Intron Sensitivity 77.06% Exact Exon Pred Count 291.00 Exact Exon Ann Count 370.00 Exact Exon Specificity 62.58% Exact Exon Sensitivity 92.27% Start Codon Pred Count 104.00 Start Codon Ann Count 138.00 Start Codon Specificity 22.37% Start Codon Sensitivity 34.41% Stop Codon Pred Count 141.00 Stop Codon Ann Count 179.00 Stop Codon Specificity 30.32% Stop Codon Sensitivity 44.64% Start Stop Pred Count 0.00 Start Stop Ann Count 0.00 Start Stop Specificity 0.00% Start Stop Sensitivity 0.00% Single Exon Count 1147.00 Ann Count 419.00 Average Length 690.11 Median Length 492.00 Total Length 791556.00 Average Coding Length 687.11 Median Coding Length 489.00 Total Coding Length 788115.00 Average Score 0.97 Total Score 1112.54 Ave Exons Per 1.00 Med Exons Per 1.00 Total Exons 1147.00 Consistent Pred Count 284.00 Consistent Ann Count 284.00 Consistent Specificity 24.76% Consistent Sensitivity 67.78% Exact Pred Count 284.00 Exact Ann Count 284.00 Exact Specificity 24.76% Exact Sensitivity 67.78% Full Exact Pred Count 284.00 Full Exact Ann Count 284.00 Full Exact Specificity 24.76% Full Exact Sensitivity 67.78% Genomic Overlap Pred Count 364.00 Genomic Overlap Ann Count 377.00 Genomic Overlap Specificity 31.73% Genomic Overlap Sensitivity 89.98% CDS Overlap Pred Count 338.00 CDS Overlap Ann Count 376.00 CDS Overlap Specificity 29.47% CDS Overlap Sensitivity 89.74% All Introns Pred Count 0.00 All Introns Ann Count 0.00 All Introns Specificity 0.00% All Introns Sensitivity 0.00% Exact UTR5 Pred Count 295.00 Exact UTR5 Ann Count 302.00 Exact UTR5 Specificity 25.72% Exact UTR5 Sensitivity 72.08% Exact UTR3 Pred Count 327.00 Exact UTR3 Ann Count 347.00 Exact UTR3 Specificity 28.51% Exact UTR3 Sensitivity 82.82% Exact Intron Pred Count 0.00 Exact Intron Ann Count 0.00 Exact Intron Specificity 0.00% Exact Intron Sensitivity 0.00% Exact Exon Pred Count 284.00 Exact Exon Ann Count 285.00 Exact Exon Specificity 24.76% Exact Exon Sensitivity 68.02% Start Codon Pred Count 295.00 Start Codon Ann Count 302.00 Start Codon Specificity 25.72% Start Codon Sensitivity 72.08% Stop Codon Pred Count 327.00 Stop Codon Ann Count 347.00 Stop Codon Specificity 28.51% Stop Codon Sensitivity 82.82% Start Stop Pred Count 284.00 Start Stop Ann Count 284.00 Start Stop Specificity 24.76% Start Stop Sensitivity 67.78% Exon All Count 51782.00 Ann Count 36610.00 Average Length 176.76 Median Length 124.00 Total Length 9152925.00 Average Score 0.99 Total Score 51289.66 Correct Pred Count 34243.00 Correct Ann Count 34243.00 Correct Specificity 66.13% Correct Sensitivity 93.53% Overlap Pred Count 35425.00 Overlap Ann Count 35640.00 Overlap Specificity 68.41% Overlap Sensitivity 97.35% Overlap 80p Pred Count 34918.00 Overlap 80p Ann Count 35006.00 Overlap 80p Specificity 67.43% Overlap 80p Sensitivity 95.62% Splice 5 Pred Count 34581.00 Splice 5 Ann Count 34692.00 Splice 5 Specificity 66.78% Splice 5 Sensitivity 94.76% Splice 3 Pred Count 35066.00 Splice 3 Ann Count 35169.00 Splice 3 Specificity 67.72% Splice 3 Sensitivity 96.06% Initial Count 5195.00 Ann Count 3557.00 Average Length 195.80 Median Length 102.00 Total Length 1017192.00 Average Score 0.98 Total Score 5070.05 Correct Pred Count 2824.00 Correct Ann Count 2827.00 Correct Specificity 54.36% Correct Sensitivity 79.48% Overlap Pred Count 3184.00 Overlap Ann Count 3286.00 Overlap Specificity 61.29% Overlap Sensitivity 92.38% Overlap 80p Pred Count 2997.00 Overlap 80p Ann Count 3042.00 Overlap 80p Specificity 57.69% Overlap 80p Sensitivity 85.52% Splice 5 Pred Count 2860.00 Splice 5 Ann Count 2861.00 Splice 5 Specificity 55.05% Splice 5 Sensitivity 80.43% Splice 3 Pred Count 3142.00 Splice 3 Ann Count 3248.00 Splice 3 Specificity 60.48% Splice 3 Sensitivity 91.31% Internal Count 40212.00 Ann Count 29035.00 Average Length 150.68 Median Length 123.00 Total Length 6059118.00 Average Score 1.00 Total Score 40012.69 Correct Pred Count 28091.00 Correct Ann Count 28090.00 Correct Specificity 69.86% Correct Sensitivity 96.75% Overlap Pred Count 28720.00 Overlap Ann Count 28666.00 Overlap Specificity 71.42% Overlap Sensitivity 98.73% Overlap 80p Pred Count 28474.00 Overlap 80p Ann Count 28431.00 Overlap 80p Specificity 70.81% Overlap 80p Sensitivity 97.92% Splice 5 Pred Count 28308.00 Splice 5 Ann Count 28267.00 Splice 5 Specificity 70.40% Splice 5 Sensitivity 97.35% Splice 3 Pred Count 28496.00 Splice 3 Ann Count 28486.00 Splice 3 Specificity 70.86% Splice 3 Sensitivity 98.11% Terminal Count 5228.00 Ann Count 3601.00 Average Length 246.46 Median Length 136.00 Total Length 1288500.00 Average Score 0.97 Total Score 5094.38 Correct Pred Count 3044.00 Correct Ann Count 3043.00 Correct Specificity 58.22% Correct Sensitivity 84.50% Overlap Pred Count 3183.00 Overlap Ann Count 3314.00 Overlap Specificity 60.88% Overlap Sensitivity 92.03% Overlap 80p Pred Count 3116.00 Overlap 80p Ann Count 3173.00 Overlap 80p Specificity 59.60% Overlap 80p Sensitivity 88.11% Splice 5 Pred Count 3118.00 Splice 5 Ann Count 3263.00 Splice 5 Specificity 59.64% Splice 5 Sensitivity 90.61% Splice 3 Pred Count 3101.00 Splice 3 Ann Count 3090.00 Splice 3 Specificity 59.32% Splice 3 Sensitivity 85.81% Single Count 1147.00 Ann Count 419.00 Average Length 687.11 Median Length 489.00 Total Length 788115.00 Average Score 0.97 Total Score 1112.54 Correct Pred Count 284.00 Correct Ann Count 285.00 Correct Specificity 24.76% Correct Sensitivity 68.02% Overlap Pred Count 338.00 Overlap Ann Count 376.00 Overlap Specificity 29.47% Overlap Sensitivity 89.74% Overlap 80p Pred Count 331.00 Overlap 80p Ann Count 362.00 Overlap 80p Specificity 28.86% Overlap 80p Sensitivity 86.40% Splice 5 Pred Count 295.00 Splice 5 Ann Count 303.00 Splice 5 Specificity 25.72% Splice 5 Sensitivity 72.32% Splice 3 Pred Count 327.00 Splice 3 Ann Count 347.00 Splice 3 Specificity 28.51% Splice 3 Sensitivity 82.82% UTR3 Count 0.00 Ann Count 0.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% UTR5 Count 0.00 Ann Count 0.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Intron Count 45191.00 Ann Count 32689.00 Average Length 4569.54 Median Length 1605.00 Total Length 206502098.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 30421.00 Correct Ann Count 30421.00 Correct Specificity 67.32% Correct Sensitivity 93.06% Overlap Pred Count 32400.00 Overlap Ann Count 32384.00 Overlap Specificity 71.70% Overlap Sensitivity 99.07% Overlap 80p Pred Count 30872.00 Overlap 80p Ann Count 30987.00 Overlap 80p Specificity 68.31% Overlap 80p Sensitivity 94.79% Splice 5 Pred Count 31492.00 Splice 5 Ann Count 31834.00 Splice 5 Specificity 69.69% Splice 5 Sensitivity 97.38% Splice 3 Pred Count 31260.00 Splice 3 Ann Count 31581.00 Splice 3 Specificity 69.17% Splice 3 Sensitivity 96.61% InframeOptional Count 0.00 Ann Count 45.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 34.00 Correct Specificity 0.00% Correct Sensitivity 75.56% Overlap Pred Count 0.00 Overlap Ann Count 35.00 Overlap Specificity 0.00% Overlap Sensitivity 77.78% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 34.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 75.56% Splice 5 Pred Count 0.00 Splice 5 Ann Count 34.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 75.56% Splice 3 Pred Count 0.00 Splice 3 Ann Count 35.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 77.78% FrameshiftOptional Count 0.00 Ann Count 15.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 12.00 Correct Specificity 0.00% Correct Sensitivity 80.00% Overlap Pred Count 0.00 Overlap Ann Count 12.00 Overlap Specificity 0.00% Overlap Sensitivity 80.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 12.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 80.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 12.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 80.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 12.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 80.00% Nuc All Count 9152925.00 Ann Count 6226624.00 Correct Pred Count 6073234.00 Correct Ann Count 6073234.00 Correct Specificity 66.35% Correct Sensitivity 97.54% Initial Count 1017192.00 Ann Count 715491.00 Correct Pred Count 669625.00 Correct Ann Count 682619.00 Correct Specificity 65.83% Correct Sensitivity 95.41% Internal Count 6059118.00 Ann Count 4185149.00 Correct Pred Count 4210593.00 Correct Ann Count 4137377.00 Correct Specificity 69.49% Correct Sensitivity 98.86% Terminal Count 1288500.00 Ann Count 898093.00 Correct Pred Count 815120.00 Correct Ann Count 852448.00 Correct Specificity 63.26% Correct Sensitivity 94.92% Single Count 788115.00 Ann Count 459651.00 Correct Pred Count 377896.00 Correct Ann Count 432047.00 Correct Specificity 47.95% Correct Sensitivity 93.99% UTR3 Count 0.00 Ann Count 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% UTR5 Count 0.00 Ann Count 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Intron Count 206502098.00 Ann Count 165851160.00 Correct Pred Count 140526530.00 Correct Ann Count 140526530.00 Correct Specificity 68.05% Correct Sensitivity 84.73% InframeOptional Count 0.00 Ann Count 7002.00 Correct Pred Count 0.00 Correct Ann Count 6414.00 Correct Specificity 0.00% Correct Sensitivity 91.60% FrameshiftOptional Count 0.00 Ann Count 2084.00 Correct Pred Count 0.00 Correct Ann Count 1901.00 Correct Specificity 0.00% Correct Sensitivity 91.22% Signal Splice Acceptor Count 45440.00 Ann Count 32636.00 Correct Pred Count 31426.00 Correct Ann Count 31530.00 Correct Specificity 69.16% Correct Sensitivity 96.61% Splice Donor Count 45407.00 Ann Count 32590.00 Correct Pred Count 31638.00 Correct Ann Count 31732.00 Correct Specificity 69.68% Correct Sensitivity 97.37% Start Codon Count 6342.00 Ann Count 4369.00 Correct Pred Count 3151.00 Correct Ann Count 3489.00 Correct Specificity 49.68% Correct Sensitivity 79.86% Stop Codon Count 6375.00 Ann Count 4374.00 Correct Pred Count 3429.00 Correct Ann Count 3769.00 Correct Specificity 53.79% Correct Sensitivity 86.17% Thu Oct 4 22:13:11 PDT 2007