Tue Oct 2 23:41:06 PDT 2007 **Summary Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene Sensitivity 63.63% Gene Specificity 31.77% Transcript Sensitivity 61.85% Transcript Specificity 31.77% Exon Sensitivity 93.61% Exon Specificity 50.10% Nucleotide Sensitivity 97.44% Nucleotide Specificity 50.28% **General Stats** Predictions: ann_list.txt pred_list.txt Gene All Count 3277.00 6562.00 Total Transcripts 3381.00 6562.00 Transcripts Per 1.03 1.00 Transcript All Count 3381.00 6562.00 Average Length 30777.96 24902.64 Median Length 11320.00 9092.00 Total Length 104060288.00 163411097.00 Average Coding Length 1451.77 1411.02 Median Coding Length 1161.00 1011.00 Total Coding Length 4908436.00 9259124.00 Average Score 0.00 7.57 Total Score 0.00 49696.20 Ave Exons Per 8.16 7.63 Med Exons Per 6.00 5.00 Total Exons 27580.00 50061.00 Complete Count 3182.00 6200.00 Average Length 27488.72 23299.89 Median Length 10879.00 8673.00 Total Length 87469116.00 144459296.00 Average Coding Length 1467.00 1402.00 Median Coding Length 1185.00 1017.00 Total Coding Length 4667985.00 8692398.00 Average Score 0.00 7.47 Total Score 0.00 46288.06 Ave Exons Per 8.15 7.52 Med Exons Per 6.00 5.00 Total Exons 25921.00 46595.00 Incomplete Count 199.00 362.00 Average Length 83372.72 52353.04 Median Length 22820.00 22943.00 Total Length 16591172.00 18951801.00 Average Coding Length 1208.30 1565.54 Median Coding Length 829.00 892.00 Total Coding Length 240451.00 566726.00 Average Score 0.00 9.41 Total Score 0.00 3408.14 Ave Exons Per 8.34 9.57 Med Exons Per 6.00 6.00 Total Exons 1659.00 3466.00 Single Exon Count 451.00 1511.00 Average Length 1071.51 738.46 Median Length 942.00 588.00 Total Length 483249.00 1115811.00 Average Coding Length 1068.51 735.46 Median Coding Length 939.00 585.00 Total Coding Length 481896.00 1111278.00 Average Score 0.00 0.98 Total Score 0.00 1478.84 Ave Exons Per 1.00 1.00 Med Exons Per 1.00 1.00 Total Exons 451.00 1511.00 Exon All Count 26793.00 50061.00 Average Length 178.68 184.96 Median Length 126.00 126.00 Total Length 4787480.00 9259124.00 Average Score 0.00 0.99 Total Score 0.00 49696.20 Initial Count 2772.00 4863.00 Average Length 205.07 201.24 Median Length 117.00 106.00 Total Length 568465.00 978646.00 Average Score 0.00 0.98 Total Score 0.00 4766.30 Internal Count 20803.00 38810.00 Average Length 143.45 151.64 Median Length 123.00 124.00 Total Length 2984166.00 5885187.00 Average Score 0.00 1.00 Total Score 0.00 38661.26 Terminal Count 2767.00 4877.00 Average Length 272.12 263.28 Median Length 153.00 144.00 Total Length 752953.00 1284013.00 Average Score 0.00 0.98 Total Score 0.00 4789.79 Single Count 451.00 1511.00 Average Length 1068.51 735.46 Median Length 939.00 585.00 Total Length 481896.00 1111278.00 Average Score 0.00 0.98 Total Score 0.00 1478.84 UTR3 Count 0.00 0.00 Average Length 0.00 0.00 Median Length 0.00 0.00 Total Length 0.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 UTR5 Count 0.00 0.00 Average Length 0.00 0.00 Median Length 0.00 0.00 Total Length 0.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Intron Count 23508.00 43499.00 Average Length 4102.06 3543.36 Median Length 1215.00 1282.00 Total Length 96431337.00 154132809.00 Average Score 0.00 0.00 Total Score 0.00 0.00 InframeOptional Count 23.00 0.00 Average Length 141.39 0.00 Median Length 84.00 0.00 Total Length 3252.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 FrameshiftOptional Count 4.00 0.00 Average Length 188.25 0.00 Median Length 191.00 0.00 Total Length 753.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Nuc All Count 4777651.00 9259124.00 Initial Count 567154.00 978646.00 Internal Count 2982639.00 5885187.00 Terminal Count 752758.00 1284013.00 Single Count 481896.00 1111278.00 UTR3 Count 0.00 0.00 UTR5 Count 0.00 0.00 Intron Count 95801283.00 154132809.00 InframeOptional Count 3252.00 0.00 FrameshiftOptional Count 753.00 0.00 Signal Splice Acceptor Count 23570.00 43687.00 Splice Donor Count 23575.00 43673.00 Start Codon Count 3276.00 6374.00 Stop Codon Count 3287.00 6388.00 **Detailed Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene All Count 6562.00 Ann Count 3277.00 Total Transcripts 6562.00 Transcripts Per 1.00 Consistent Pred Count 2085.00 Consistent Ann Count 2085.00 Consistent Specificity 31.77% Consistent Sensitivity 63.63% Exact Pred Count 2060.00 Exact Ann Count 2060.00 Exact Specificity 31.39% Exact Sensitivity 62.86% Full Exact Pred Count 1980.00 Full Exact Ann Count 1980.00 Full Exact Specificity 30.17% Full Exact Sensitivity 60.42% Genomic Overlap Pred Count 3370.00 Genomic Overlap Ann Count 3215.00 Genomic Overlap Specificity 51.36% Genomic Overlap Sensitivity 98.11% CDS Overlap Pred Count 3346.00 CDS Overlap Ann Count 3213.00 CDS Overlap Specificity 50.99% CDS Overlap Sensitivity 98.05% All Introns Pred Count 1834.00 All Introns Ann Count 1834.00 All Introns Specificity 27.95% All Introns Sensitivity 55.97% Exact UTR5 Pred Count 2597.00 Exact UTR5 Ann Count 2589.00 Exact UTR5 Specificity 39.58% Exact UTR5 Sensitivity 79.01% Exact UTR3 Pred Count 2937.00 Exact UTR3 Ann Count 2933.00 Exact UTR3 Specificity 44.76% Exact UTR3 Sensitivity 89.50% Exact Intron Pred Count 2804.00 Exact Intron Ann Count 2729.00 Exact Intron Specificity 42.73% Exact Intron Sensitivity 83.28% Exact Exon Pred Count 3246.00 Exact Exon Ann Count 3132.00 Exact Exon Specificity 49.47% Exact Exon Sensitivity 95.58% Start Codon Pred Count 2597.00 Start Codon Ann Count 2589.00 Start Codon Specificity 39.58% Start Codon Sensitivity 79.01% Stop Codon Pred Count 2937.00 Stop Codon Ann Count 2933.00 Stop Codon Specificity 44.76% Stop Codon Sensitivity 89.50% Start Stop Pred Count 2287.00 Start Stop Ann Count 2287.00 Start Stop Specificity 34.85% Start Stop Sensitivity 69.79% Transcript All Count 6562.00 Ann Count 3381.00 Average Length 24902.64 Median Length 9092.00 Total Length 163411097.00 Average Coding Length 1411.02 Median Coding Length 1011.00 Total Coding Length 9259124.00 Average Score 7.57 Total Score 49696.20 Ave Exons Per 7.63 Med Exons Per 5.00 Total Exons 50061.00 Consistent Pred Count 2085.00 Consistent Ann Count 2091.00 Consistent Specificity 31.77% Consistent Sensitivity 61.85% Exact Pred Count 2060.00 Exact Ann Count 2063.00 Exact Specificity 31.39% Exact Sensitivity 61.02% Full Exact Pred Count 1980.00 Full Exact Ann Count 1980.00 Full Exact Specificity 30.17% Full Exact Sensitivity 58.56% Genomic Overlap Pred Count 3370.00 Genomic Overlap Ann Count 3319.00 Genomic Overlap Specificity 51.36% Genomic Overlap Sensitivity 98.17% CDS Overlap Pred Count 3346.00 CDS Overlap Ann Count 3317.00 CDS Overlap Specificity 50.99% CDS Overlap Sensitivity 98.11% All Introns Pred Count 1834.00 All Introns Ann Count 1840.00 All Introns Specificity 27.95% All Introns Sensitivity 54.42% Exact UTR5 Pred Count 2597.00 Exact UTR5 Ann Count 2642.00 Exact UTR5 Specificity 39.58% Exact UTR5 Sensitivity 78.14% Exact UTR3 Pred Count 2937.00 Exact UTR3 Ann Count 3001.00 Exact UTR3 Specificity 44.76% Exact UTR3 Sensitivity 88.76% Exact Intron Pred Count 2804.00 Exact Intron Ann Count 2825.00 Exact Intron Specificity 42.73% Exact Intron Sensitivity 83.56% Exact Exon Pred Count 3246.00 Exact Exon Ann Count 3231.00 Exact Exon Specificity 49.47% Exact Exon Sensitivity 95.56% Start Codon Pred Count 2597.00 Start Codon Ann Count 2642.00 Start Codon Specificity 39.58% Start Codon Sensitivity 78.14% Stop Codon Pred Count 2937.00 Stop Codon Ann Count 3001.00 Stop Codon Specificity 44.76% Stop Codon Sensitivity 88.76% Start Stop Pred Count 2287.00 Start Stop Ann Count 2307.00 Start Stop Specificity 34.85% Start Stop Sensitivity 68.23% Complete Count 6200.00 Ann Count 3182.00 Average Length 23299.89 Median Length 8673.00 Total Length 144459296.00 Average Coding Length 1402.00 Median Coding Length 1017.00 Total Coding Length 8692398.00 Average Score 7.47 Total Score 46288.06 Ave Exons Per 7.52 Med Exons Per 5.00 Total Exons 46595.00 Consistent Pred Count 1993.00 Consistent Ann Count 1980.00 Consistent Specificity 32.15% Consistent Sensitivity 62.23% Exact Pred Count 1980.00 Exact Ann Count 1980.00 Exact Specificity 31.94% Exact Sensitivity 62.23% Full Exact Pred Count 1980.00 Full Exact Ann Count 1980.00 Full Exact Specificity 31.94% Full Exact Sensitivity 62.23% Genomic Overlap Pred Count 3199.00 Genomic Overlap Ann Count 3133.00 Genomic Overlap Specificity 51.60% Genomic Overlap Sensitivity 98.46% CDS Overlap Pred Count 3177.00 CDS Overlap Ann Count 3133.00 CDS Overlap Specificity 51.24% CDS Overlap Sensitivity 98.46% All Introns Pred Count 1740.00 All Introns Ann Count 1739.00 All Introns Specificity 28.06% All Introns Sensitivity 54.65% Exact UTR5 Pred Count 2542.00 Exact UTR5 Ann Count 2566.00 Exact UTR5 Specificity 41.00% Exact UTR5 Sensitivity 80.64% Exact UTR3 Pred Count 2854.00 Exact UTR3 Ann Count 2909.00 Exact UTR3 Specificity 46.03% Exact UTR3 Sensitivity 91.42% Exact Intron Pred Count 2651.00 Exact Intron Ann Count 2662.00 Exact Intron Specificity 42.76% Exact Intron Sensitivity 83.66% Exact Exon Pred Count 3080.00 Exact Exon Ann Count 3051.00 Exact Exon Specificity 49.68% Exact Exon Sensitivity 95.88% Start Codon Pred Count 2542.00 Start Codon Ann Count 2566.00 Start Codon Specificity 41.00% Start Codon Sensitivity 80.64% Stop Codon Pred Count 2854.00 Stop Codon Ann Count 2909.00 Stop Codon Specificity 46.03% Stop Codon Sensitivity 91.42% Start Stop Pred Count 2287.00 Start Stop Ann Count 2307.00 Start Stop Specificity 36.89% Start Stop Sensitivity 72.50% Incomplete Count 362.00 Ann Count 199.00 Average Length 52353.04 Median Length 22943.00 Total Length 18951801.00 Average Coding Length 1565.54 Median Coding Length 892.00 Total Coding Length 566726.00 Average Score 9.41 Total Score 3408.14 Ave Exons Per 9.57 Med Exons Per 6.00 Total Exons 3466.00 Consistent Pred Count 92.00 Consistent Ann Count 111.00 Consistent Specificity 25.41% Consistent Sensitivity 55.78% Exact Pred Count 80.00 Exact Ann Count 83.00 Exact Specificity 22.10% Exact Sensitivity 41.71% Full Exact Pred Count 0.00 Full Exact Ann Count 0.00 Full Exact Specificity 0.00% Full Exact Sensitivity 0.00% Genomic Overlap Pred Count 171.00 Genomic Overlap Ann Count 186.00 Genomic Overlap Specificity 47.24% Genomic Overlap Sensitivity 93.47% CDS Overlap Pred Count 169.00 CDS Overlap Ann Count 184.00 CDS Overlap Specificity 46.69% CDS Overlap Sensitivity 92.46% All Introns Pred Count 94.00 All Introns Ann Count 101.00 All Introns Specificity 25.97% All Introns Sensitivity 50.75% Exact UTR5 Pred Count 55.00 Exact UTR5 Ann Count 76.00 Exact UTR5 Specificity 15.19% Exact UTR5 Sensitivity 38.19% Exact UTR3 Pred Count 83.00 Exact UTR3 Ann Count 92.00 Exact UTR3 Specificity 22.93% Exact UTR3 Sensitivity 46.23% Exact Intron Pred Count 153.00 Exact Intron Ann Count 163.00 Exact Intron Specificity 42.27% Exact Intron Sensitivity 81.91% Exact Exon Pred Count 166.00 Exact Exon Ann Count 180.00 Exact Exon Specificity 45.86% Exact Exon Sensitivity 90.45% Start Codon Pred Count 55.00 Start Codon Ann Count 76.00 Start Codon Specificity 15.19% Start Codon Sensitivity 38.19% Stop Codon Pred Count 83.00 Stop Codon Ann Count 92.00 Stop Codon Specificity 22.93% Stop Codon Sensitivity 46.23% Start Stop Pred Count 0.00 Start Stop Ann Count 0.00 Start Stop Specificity 0.00% Start Stop Sensitivity 0.00% Single Exon Count 1511.00 Ann Count 451.00 Average Length 738.46 Median Length 588.00 Total Length 1115811.00 Average Coding Length 735.46 Median Coding Length 585.00 Total Coding Length 1111278.00 Average Score 0.98 Total Score 1478.84 Ave Exons Per 1.00 Med Exons Per 1.00 Total Exons 1511.00 Consistent Pred Count 371.00 Consistent Ann Count 371.00 Consistent Specificity 24.55% Consistent Sensitivity 82.26% Exact Pred Count 371.00 Exact Ann Count 371.00 Exact Specificity 24.55% Exact Sensitivity 82.26% Full Exact Pred Count 371.00 Full Exact Ann Count 371.00 Full Exact Specificity 24.55% Full Exact Sensitivity 82.26% Genomic Overlap Pred Count 462.00 Genomic Overlap Ann Count 440.00 Genomic Overlap Specificity 30.58% Genomic Overlap Sensitivity 97.56% CDS Overlap Pred Count 442.00 CDS Overlap Ann Count 440.00 CDS Overlap Specificity 29.25% CDS Overlap Sensitivity 97.56% All Introns Pred Count 0.00 All Introns Ann Count 0.00 All Introns Specificity 0.00% All Introns Sensitivity 0.00% Exact UTR5 Pred Count 381.00 Exact UTR5 Ann Count 380.00 Exact UTR5 Specificity 25.22% Exact UTR5 Sensitivity 84.26% Exact UTR3 Pred Count 431.00 Exact UTR3 Ann Count 428.00 Exact UTR3 Specificity 28.52% Exact UTR3 Sensitivity 94.90% Exact Intron Pred Count 0.00 Exact Intron Ann Count 0.00 Exact Intron Specificity 0.00% Exact Intron Sensitivity 0.00% Exact Exon Pred Count 371.00 Exact Exon Ann Count 371.00 Exact Exon Specificity 24.55% Exact Exon Sensitivity 82.26% Start Codon Pred Count 381.00 Start Codon Ann Count 380.00 Start Codon Specificity 25.22% Start Codon Sensitivity 84.26% Stop Codon Pred Count 431.00 Stop Codon Ann Count 428.00 Stop Codon Specificity 28.52% Stop Codon Sensitivity 94.90% Start Stop Pred Count 371.00 Start Stop Ann Count 371.00 Start Stop Specificity 24.55% Start Stop Sensitivity 82.26% Exon All Count 50061.00 Ann Count 26793.00 Average Length 184.96 Median Length 126.00 Total Length 9259124.00 Average Score 0.99 Total Score 49696.20 Correct Pred Count 25081.00 Correct Ann Count 25081.00 Correct Specificity 50.10% Correct Sensitivity 93.61% Overlap Pred Count 25985.00 Overlap Ann Count 26045.00 Overlap Specificity 51.91% Overlap Sensitivity 97.21% Overlap 80p Pred Count 25646.00 Overlap 80p Ann Count 25664.00 Overlap 80p Specificity 51.23% Overlap 80p Sensitivity 95.79% Splice 5 Pred Count 25300.00 Splice 5 Ann Count 25318.00 Splice 5 Specificity 50.54% Splice 5 Sensitivity 94.49% Splice 3 Pred Count 25763.00 Splice 3 Ann Count 25792.00 Splice 3 Specificity 51.46% Splice 3 Sensitivity 96.26% Initial Count 4863.00 Ann Count 2772.00 Average Length 201.24 Median Length 106.00 Total Length 978646.00 Average Score 0.98 Total Score 4766.30 Correct Pred Count 2201.00 Correct Ann Count 2204.00 Correct Specificity 45.26% Correct Sensitivity 79.51% Overlap Pred Count 2478.00 Overlap Ann Count 2550.00 Overlap Specificity 50.96% Overlap Sensitivity 91.99% Overlap 80p Pred Count 2335.00 Overlap 80p Ann Count 2382.00 Overlap 80p Specificity 48.02% Overlap 80p Sensitivity 85.93% Splice 5 Pred Count 2217.00 Splice 5 Ann Count 2222.00 Splice 5 Specificity 45.59% Splice 5 Sensitivity 80.16% Splice 3 Pred Count 2455.00 Splice 3 Ann Count 2528.00 Splice 3 Specificity 50.48% Splice 3 Sensitivity 91.20% Internal Count 38810.00 Ann Count 20803.00 Average Length 151.64 Median Length 124.00 Total Length 5885187.00 Average Score 1.00 Total Score 38661.26 Correct Pred Count 20035.00 Correct Ann Count 20032.00 Correct Specificity 51.62% Correct Sensitivity 96.29% Overlap Pred Count 20493.00 Overlap Ann Count 20461.00 Overlap Specificity 52.80% Overlap Sensitivity 98.36% Overlap 80p Pred Count 20338.00 Overlap 80p Ann Count 20306.00 Overlap 80p Specificity 52.40% Overlap 80p Sensitivity 97.61% Splice 5 Pred Count 20164.00 Splice 5 Ann Count 20164.00 Splice 5 Specificity 51.96% Splice 5 Sensitivity 96.93% Splice 3 Pred Count 20372.00 Splice 3 Ann Count 20327.00 Splice 3 Specificity 52.49% Splice 3 Sensitivity 97.71% Terminal Count 4877.00 Ann Count 2767.00 Average Length 263.28 Median Length 144.00 Total Length 1284013.00 Average Score 0.98 Total Score 4789.79 Correct Pred Count 2474.00 Correct Ann Count 2474.00 Correct Specificity 50.73% Correct Sensitivity 89.41% Overlap Pred Count 2572.00 Overlap Ann Count 2594.00 Overlap Specificity 52.74% Overlap Sensitivity 93.75% Overlap 80p Pred Count 2540.00 Overlap 80p Ann Count 2546.00 Overlap 80p Specificity 52.08% Overlap 80p Sensitivity 92.01% Splice 5 Pred Count 2538.00 Splice 5 Ann Count 2552.00 Splice 5 Specificity 52.04% Splice 5 Sensitivity 92.23% Splice 3 Pred Count 2505.00 Splice 3 Ann Count 2509.00 Splice 3 Specificity 51.36% Splice 3 Sensitivity 90.68% Single Count 1511.00 Ann Count 451.00 Average Length 735.46 Median Length 585.00 Total Length 1111278.00 Average Score 0.98 Total Score 1478.84 Correct Pred Count 371.00 Correct Ann Count 371.00 Correct Specificity 24.55% Correct Sensitivity 82.26% Overlap Pred Count 442.00 Overlap Ann Count 440.00 Overlap Specificity 29.25% Overlap Sensitivity 97.56% Overlap 80p Pred Count 433.00 Overlap 80p Ann Count 430.00 Overlap 80p Specificity 28.66% Overlap 80p Sensitivity 95.34% Splice 5 Pred Count 381.00 Splice 5 Ann Count 380.00 Splice 5 Specificity 25.22% Splice 5 Sensitivity 84.26% Splice 3 Pred Count 431.00 Splice 3 Ann Count 428.00 Splice 3 Specificity 28.52% Splice 3 Sensitivity 94.90% UTR3 Count 0.00 Ann Count 0.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% UTR5 Count 0.00 Ann Count 0.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Intron Count 43499.00 Ann Count 23508.00 Average Length 3543.36 Median Length 1282.00 Total Length 154132809.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 22011.00 Correct Ann Count 22011.00 Correct Specificity 50.60% Correct Sensitivity 93.63% Overlap Pred Count 23327.00 Overlap Ann Count 23183.00 Overlap Specificity 53.63% Overlap Sensitivity 98.62% Overlap 80p Pred Count 22362.00 Overlap 80p Ann Count 22379.00 Overlap 80p Specificity 51.41% Overlap 80p Sensitivity 95.20% Splice 5 Pred Count 22749.00 Splice 5 Ann Count 22795.00 Splice 5 Specificity 52.30% Splice 5 Sensitivity 96.97% Splice 3 Pred Count 22605.00 Splice 3 Ann Count 22654.00 Splice 3 Specificity 51.97% Splice 3 Sensitivity 96.37% InframeOptional Count 0.00 Ann Count 23.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 17.00 Correct Specificity 0.00% Correct Sensitivity 73.91% Overlap Pred Count 0.00 Overlap Ann Count 17.00 Overlap Specificity 0.00% Overlap Sensitivity 73.91% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 17.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 73.91% Splice 5 Pred Count 0.00 Splice 5 Ann Count 17.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 73.91% Splice 3 Pred Count 0.00 Splice 3 Ann Count 17.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 73.91% FrameshiftOptional Count 0.00 Ann Count 4.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 3.00 Correct Specificity 0.00% Correct Sensitivity 75.00% Overlap Pred Count 0.00 Overlap Ann Count 3.00 Overlap Specificity 0.00% Overlap Sensitivity 75.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 3.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 75.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 3.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 75.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 3.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 75.00% Nuc All Count 9259124.00 Ann Count 4777651.00 Correct Pred Count 4655195.00 Correct Ann Count 4655195.00 Correct Specificity 50.28% Correct Sensitivity 97.44% Initial Count 978646.00 Ann Count 567154.00 Correct Pred Count 515934.00 Correct Ann Count 538752.00 Correct Specificity 52.72% Correct Sensitivity 94.99% Internal Count 5885187.00 Ann Count 2982639.00 Correct Pred Count 2985932.00 Correct Ann Count 2937226.00 Correct Specificity 50.74% Correct Sensitivity 98.48% Terminal Count 1284013.00 Ann Count 752758.00 Correct Pred Count 692481.00 Correct Ann Count 717309.00 Correct Specificity 53.93% Correct Sensitivity 95.29% Single Count 1111278.00 Ann Count 481896.00 Correct Pred Count 460848.00 Correct Ann Count 468484.00 Correct Specificity 41.47% Correct Sensitivity 97.22% UTR3 Count 0.00 Ann Count 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% UTR5 Count 0.00 Ann Count 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Intron Count 154132809.00 Ann Count 95801283.00 Correct Pred Count 80061323.00 Correct Ann Count 80061323.00 Correct Specificity 51.94% Correct Sensitivity 83.57% InframeOptional Count 0.00 Ann Count 3252.00 Correct Pred Count 0.00 Correct Ann Count 2907.00 Correct Specificity 0.00% Correct Sensitivity 89.39% FrameshiftOptional Count 0.00 Ann Count 753.00 Correct Pred Count 0.00 Correct Ann Count 668.00 Correct Specificity 0.00% Correct Sensitivity 88.71% Signal Splice Acceptor Count 43687.00 Ann Count 23570.00 Correct Pred Count 22702.00 Correct Ann Count 22716.00 Correct Specificity 51.97% Correct Sensitivity 96.38% Splice Donor Count 43673.00 Ann Count 23575.00 Correct Pred Count 22827.00 Correct Ann Count 22855.00 Correct Specificity 52.27% Correct Sensitivity 96.95% Start Codon Count 6374.00 Ann Count 3276.00 Correct Pred Count 2597.00 Correct Ann Count 2642.00 Correct Specificity 40.74% Correct Sensitivity 80.65% Stop Codon Count 6388.00 Ann Count 3287.00 Correct Pred Count 2937.00 Correct Ann Count 3001.00 Correct Specificity 45.98% Correct Sensitivity 91.30% Tue Oct 2 23:42:06 PDT 2007