Thu Oct 4 21:01:50 PDT 2007 **Summary Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene Sensitivity 57.29% Gene Specificity 17.84% Transcript Sensitivity 56.51% Transcript Specificity 17.84% Exon Sensitivity 90.32% Exon Specificity 26.74% Nucleotide Sensitivity 94.71% Nucleotide Specificity 25.91% **General Stats** Predictions: ann_list.txt pred_list.txt Gene All Count 1805.00 5814.00 Total Transcripts 1844.00 5814.00 Transcripts Per 1.02 1.00 Transcript All Count 1844.00 5814.00 Average Length 29223.43 26084.21 Median Length 13182.00 11036.00 Total Length 53887997.00 151653610.00 Average Coding Length 1256.24 1436.00 Median Coding Length 1038.00 999.00 Total Coding Length 2316506.00 8348927.00 Average Score 0.00 8.05 Total Score 0.00 46817.13 Ave Exons Per 7.73 8.16 Med Exons Per 6.00 5.00 Total Exons 14246.00 47451.00 Complete Count 1730.00 5471.00 Average Length 27206.49 25058.68 Median Length 12756.00 10663.00 Total Length 47067232.00 137096049.00 Average Coding Length 1268.09 1439.79 Median Coding Length 1053.00 1002.00 Total Coding Length 2193795.00 7877094.00 Average Score 0.00 8.01 Total Score 0.00 43814.45 Ave Exons Per 7.81 8.11 Med Exons Per 6.00 5.00 Total Exons 13516.00 44389.00 Incomplete Count 114.00 343.00 Average Length 59831.27 42441.87 Median Length 23202.00 19649.00 Total Length 6820765.00 14557561.00 Average Coding Length 1076.41 1375.61 Median Coding Length 767.00 889.00 Total Coding Length 122711.00 471833.00 Average Score 0.00 8.75 Total Score 0.00 3002.68 Ave Exons Per 6.40 8.93 Med Exons Per 4.00 5.00 Total Exons 730.00 3062.00 Single Exon Count 216.00 1135.00 Average Length 5000.96 837.05 Median Length 1552.00 780.00 Total Length 1080208.00 950049.00 Average Coding Length 978.92 834.05 Median Coding Length 942.00 777.00 Total Coding Length 211446.00 946644.00 Average Score 0.00 0.96 Total Score 0.00 1092.40 Ave Exons Per 1.00 1.00 Med Exons Per 1.00 1.00 Total Exons 216.00 1135.00 Exon All Count 14050.00 47451.00 Average Length 162.65 175.95 Median Length 121.00 124.00 Total Length 2285226.00 8348927.00 Average Score 0.00 0.99 Total Score 0.00 46817.13 Initial Count 1547.00 4491.00 Average Length 163.38 185.92 Median Length 102.00 100.00 Total Length 252749.00 834985.00 Average Score 0.00 0.96 Total Score 0.00 4323.16 Internal Count 10744.00 37301.00 Average Length 137.43 145.74 Median Length 119.00 123.00 Total Length 1476561.00 5436162.00 Average Score 0.00 0.99 Total Score 0.00 37007.81 Terminal Count 1549.00 4524.00 Average Length 226.43 250.03 Median Length 141.00 139.00 Total Length 350737.00 1131136.00 Average Score 0.00 0.97 Total Score 0.00 4393.76 Single Count 210.00 1135.00 Average Length 977.04 834.05 Median Length 942.00 777.00 Total Length 205179.00 946644.00 Average Score 0.00 0.96 Total Score 0.00 1092.40 UTR3 Count 1736.00 0.00 Average Length 528.32 0.00 Median Length 338.00 0.00 Total Length 917158.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 UTR5 Count 2260.00 0.00 Average Length 96.93 0.00 Median Length 62.00 0.00 Total Length 219058.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Intron Count 12250.00 41637.00 Average Length 3493.94 3441.36 Median Length 1142.00 1290.00 Total Length 42800786.00 143287706.00 Average Score 0.00 0.00 Total Score 0.00 0.00 InframeOptional Count 5.00 0.00 Average Length 88.80 0.00 Median Length 63.00 0.00 Total Length 444.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 FrameshiftOptional Count 1.00 0.00 Average Length 79.00 0.00 Median Length 79.00 0.00 Total Length 79.00 0.00 Average Score 0.00 0.00 Total Score 0.00 0.00 Nuc All Count 2283878.00 8348927.00 Initial Count 252690.00 834985.00 Internal Count 1476523.00 5436162.00 Terminal Count 350736.00 1131136.00 Single Count 205179.00 946644.00 UTR3 Count 915589.00 0.00 UTR5 Count 218372.00 0.00 Intron Count 42691795.00 143287706.00 InframeOptional Count 444.00 0.00 FrameshiftOptional Count 79.00 0.00 Signal Splice Acceptor Count 12293.00 41825.00 Splice Donor Count 12291.00 41792.00 Start Codon Count 1784.00 5626.00 Stop Codon Count 1785.00 5659.00 **Detailed Stats** Annotation: ann_list.txt Predictions: pred_list.txt Gene All Count 5814.00 Ann Count 1805.00 Total Transcripts 5814.00 Transcripts Per 1.00 Consistent Pred Count 1037.00 Consistent Ann Count 1034.00 Consistent Specificity 17.84% Consistent Sensitivity 57.29% Exact Pred Count 1031.00 Exact Ann Count 1028.00 Exact Specificity 17.73% Exact Sensitivity 56.95% Full Exact Pred Count 76.00 Full Exact Ann Count 76.00 Full Exact Specificity 1.31% Full Exact Sensitivity 4.21% Genomic Overlap Pred Count 1775.00 Genomic Overlap Ann Count 1741.00 Genomic Overlap Specificity 30.53% Genomic Overlap Sensitivity 96.45% CDS Overlap Pred Count 1769.00 CDS Overlap Ann Count 1739.00 CDS Overlap Specificity 30.43% CDS Overlap Sensitivity 96.34% All Introns Pred Count 945.00 All Introns Ann Count 944.00 All Introns Specificity 16.25% All Introns Sensitivity 52.30% Exact UTR5 Pred Count 107.00 Exact UTR5 Ann Count 107.00 Exact UTR5 Specificity 1.84% Exact UTR5 Sensitivity 5.93% Exact UTR3 Pred Count 137.00 Exact UTR3 Ann Count 137.00 Exact UTR3 Specificity 2.36% Exact UTR3 Sensitivity 7.59% Exact Intron Pred Count 1535.00 Exact Intron Ann Count 1515.00 Exact Intron Specificity 26.40% Exact Intron Sensitivity 83.93% Exact Exon Pred Count 1699.00 Exact Exon Ann Count 1669.00 Exact Exon Specificity 29.22% Exact Exon Sensitivity 92.47% Start Codon Pred Count 1330.00 Start Codon Ann Count 1325.00 Start Codon Specificity 22.88% Start Codon Sensitivity 73.41% Stop Codon Pred Count 1490.00 Stop Codon Ann Count 1485.00 Stop Codon Specificity 25.63% Stop Codon Sensitivity 82.27% Start Stop Pred Count 1124.00 Start Stop Ann Count 1121.00 Start Stop Specificity 19.33% Start Stop Sensitivity 62.11% Transcript All Count 5814.00 Ann Count 1844.00 Average Length 26084.21 Median Length 11036.00 Total Length 151653610.00 Average Coding Length 1436.00 Median Coding Length 999.00 Total Coding Length 8348927.00 Average Score 8.05 Total Score 46817.13 Ave Exons Per 8.16 Med Exons Per 5.00 Total Exons 47451.00 Consistent Pred Count 1037.00 Consistent Ann Count 1042.00 Consistent Specificity 17.84% Consistent Sensitivity 56.51% Exact Pred Count 1031.00 Exact Ann Count 1036.00 Exact Specificity 17.73% Exact Sensitivity 56.18% Full Exact Pred Count 76.00 Full Exact Ann Count 76.00 Full Exact Specificity 1.31% Full Exact Sensitivity 4.12% Genomic Overlap Pred Count 1775.00 Genomic Overlap Ann Count 1780.00 Genomic Overlap Specificity 30.53% Genomic Overlap Sensitivity 96.53% CDS Overlap Pred Count 1769.00 CDS Overlap Ann Count 1778.00 CDS Overlap Specificity 30.43% CDS Overlap Sensitivity 96.42% All Introns Pred Count 945.00 All Introns Ann Count 948.00 All Introns Specificity 16.25% All Introns Sensitivity 51.41% Exact UTR5 Pred Count 107.00 Exact UTR5 Ann Count 108.00 Exact UTR5 Specificity 1.84% Exact UTR5 Sensitivity 5.86% Exact UTR3 Pred Count 137.00 Exact UTR3 Ann Count 137.00 Exact UTR3 Specificity 2.36% Exact UTR3 Sensitivity 7.43% Exact Intron Pred Count 1535.00 Exact Intron Ann Count 1542.00 Exact Intron Specificity 26.40% Exact Intron Sensitivity 83.62% Exact Exon Pred Count 1699.00 Exact Exon Ann Count 1702.00 Exact Exon Specificity 29.22% Exact Exon Sensitivity 92.30% Start Codon Pred Count 1330.00 Start Codon Ann Count 1353.00 Start Codon Specificity 22.88% Start Codon Sensitivity 73.37% Stop Codon Pred Count 1490.00 Stop Codon Ann Count 1510.00 Stop Codon Specificity 25.63% Stop Codon Sensitivity 81.89% Start Stop Pred Count 1124.00 Start Stop Ann Count 1136.00 Start Stop Specificity 19.33% Start Stop Sensitivity 61.61% Complete Count 5471.00 Ann Count 1730.00 Average Length 25058.68 Median Length 10663.00 Total Length 137096049.00 Average Coding Length 1439.79 Median Coding Length 1002.00 Total Coding Length 7877094.00 Average Score 8.01 Total Score 43814.45 Ave Exons Per 8.11 Med Exons Per 5.00 Total Exons 44389.00 Consistent Pred Count 984.00 Consistent Ann Count 985.00 Consistent Specificity 17.99% Consistent Sensitivity 56.94% Exact Pred Count 980.00 Exact Ann Count 985.00 Exact Specificity 17.91% Exact Sensitivity 56.94% Full Exact Pred Count 76.00 Full Exact Ann Count 76.00 Full Exact Specificity 1.39% Full Exact Sensitivity 4.39% Genomic Overlap Pred Count 1684.00 Genomic Overlap Ann Count 1684.00 Genomic Overlap Specificity 30.78% Genomic Overlap Sensitivity 97.34% CDS Overlap Pred Count 1678.00 CDS Overlap Ann Count 1682.00 CDS Overlap Specificity 30.67% CDS Overlap Sensitivity 97.23% All Introns Pred Count 896.00 All Introns Ann Count 897.00 All Introns Specificity 16.38% All Introns Sensitivity 51.85% Exact UTR5 Pred Count 105.00 Exact UTR5 Ann Count 105.00 Exact UTR5 Specificity 1.92% Exact UTR5 Sensitivity 6.07% Exact UTR3 Pred Count 135.00 Exact UTR3 Ann Count 135.00 Exact UTR3 Specificity 2.47% Exact UTR3 Sensitivity 7.80% Exact Intron Pred Count 1457.00 Exact Intron Ann Count 1459.00 Exact Intron Specificity 26.63% Exact Intron Sensitivity 84.34% Exact Exon Pred Count 1610.00 Exact Exon Ann Count 1610.00 Exact Exon Specificity 29.43% Exact Exon Sensitivity 93.06% Start Codon Pred Count 1301.00 Start Codon Ann Count 1323.00 Start Codon Specificity 23.78% Start Codon Sensitivity 76.47% Stop Codon Pred Count 1450.00 Stop Codon Ann Count 1463.00 Stop Codon Specificity 26.50% Stop Codon Sensitivity 84.57% Start Stop Pred Count 1124.00 Start Stop Ann Count 1136.00 Start Stop Specificity 20.54% Start Stop Sensitivity 65.66% Incomplete Count 343.00 Ann Count 114.00 Average Length 42441.87 Median Length 19649.00 Total Length 14557561.00 Average Coding Length 1375.61 Median Coding Length 889.00 Total Coding Length 471833.00 Average Score 8.75 Total Score 3002.68 Ave Exons Per 8.93 Med Exons Per 5.00 Total Exons 3062.00 Consistent Pred Count 53.00 Consistent Ann Count 57.00 Consistent Specificity 15.45% Consistent Sensitivity 50.00% Exact Pred Count 51.00 Exact Ann Count 51.00 Exact Specificity 14.87% Exact Sensitivity 44.74% Full Exact Pred Count 0.00 Full Exact Ann Count 0.00 Full Exact Specificity 0.00% Full Exact Sensitivity 0.00% Genomic Overlap Pred Count 91.00 Genomic Overlap Ann Count 96.00 Genomic Overlap Specificity 26.53% Genomic Overlap Sensitivity 84.21% CDS Overlap Pred Count 91.00 CDS Overlap Ann Count 96.00 CDS Overlap Specificity 26.53% CDS Overlap Sensitivity 84.21% All Introns Pred Count 49.00 All Introns Ann Count 51.00 All Introns Specificity 14.29% All Introns Sensitivity 44.74% Exact UTR5 Pred Count 2.00 Exact UTR5 Ann Count 3.00 Exact UTR5 Specificity 0.58% Exact UTR5 Sensitivity 2.63% Exact UTR3 Pred Count 2.00 Exact UTR3 Ann Count 2.00 Exact UTR3 Specificity 0.58% Exact UTR3 Sensitivity 1.75% Exact Intron Pred Count 78.00 Exact Intron Ann Count 83.00 Exact Intron Specificity 22.74% Exact Intron Sensitivity 72.81% Exact Exon Pred Count 89.00 Exact Exon Ann Count 92.00 Exact Exon Specificity 25.95% Exact Exon Sensitivity 80.70% Start Codon Pred Count 29.00 Start Codon Ann Count 30.00 Start Codon Specificity 8.45% Start Codon Sensitivity 26.32% Stop Codon Pred Count 40.00 Stop Codon Ann Count 47.00 Stop Codon Specificity 11.66% Stop Codon Sensitivity 41.23% Start Stop Pred Count 0.00 Start Stop Ann Count 0.00 Start Stop Specificity 0.00% Start Stop Sensitivity 0.00% Single Exon Count 1135.00 Ann Count 216.00 Average Length 837.05 Median Length 780.00 Total Length 950049.00 Average Coding Length 834.05 Median Coding Length 777.00 Total Coding Length 946644.00 Average Score 0.96 Total Score 1092.40 Ave Exons Per 1.00 Med Exons Per 1.00 Total Exons 1135.00 Consistent Pred Count 134.00 Consistent Ann Count 136.00 Consistent Specificity 11.81% Consistent Sensitivity 62.96% Exact Pred Count 134.00 Exact Ann Count 136.00 Exact Specificity 11.81% Exact Sensitivity 62.96% Full Exact Pred Count 51.00 Full Exact Ann Count 51.00 Full Exact Specificity 4.49% Full Exact Sensitivity 23.61% Genomic Overlap Pred Count 184.00 Genomic Overlap Ann Count 196.00 Genomic Overlap Specificity 16.21% Genomic Overlap Sensitivity 90.74% CDS Overlap Pred Count 182.00 CDS Overlap Ann Count 195.00 CDS Overlap Specificity 16.04% CDS Overlap Sensitivity 90.28% All Introns Pred Count 0.00 All Introns Ann Count 0.00 All Introns Specificity 0.00% All Introns Sensitivity 0.00% Exact UTR5 Pred Count 52.00 Exact UTR5 Ann Count 52.00 Exact UTR5 Specificity 4.58% Exact UTR5 Sensitivity 24.07% Exact UTR3 Pred Count 75.00 Exact UTR3 Ann Count 73.00 Exact UTR3 Specificity 6.61% Exact UTR3 Sensitivity 33.80% Exact Intron Pred Count 0.00 Exact Intron Ann Count 0.00 Exact Intron Specificity 0.00% Exact Intron Sensitivity 0.00% Exact Exon Pred Count 134.00 Exact Exon Ann Count 137.00 Exact Exon Specificity 11.81% Exact Exon Sensitivity 63.43% Start Codon Pred Count 138.00 Start Codon Ann Count 145.00 Start Codon Specificity 12.16% Start Codon Sensitivity 67.13% Stop Codon Pred Count 176.00 Stop Codon Ann Count 182.00 Stop Codon Specificity 15.51% Stop Codon Sensitivity 84.26% Start Stop Pred Count 134.00 Start Stop Ann Count 136.00 Start Stop Specificity 11.81% Start Stop Sensitivity 62.96% Exon All Count 47451.00 Ann Count 14050.00 Average Length 175.95 Median Length 124.00 Total Length 8348927.00 Average Score 0.99 Total Score 46817.13 Correct Pred Count 12690.00 Correct Ann Count 12690.00 Correct Specificity 26.74% Correct Sensitivity 90.32% Overlap Pred Count 13308.00 Overlap Ann Count 13313.00 Overlap Specificity 28.05% Overlap Sensitivity 94.75% Overlap 80p Pred Count 13044.00 Overlap 80p Ann Count 13048.00 Overlap 80p Specificity 27.49% Overlap 80p Sensitivity 92.87% Splice 5 Pred Count 12887.00 Splice 5 Ann Count 12890.00 Splice 5 Specificity 27.16% Splice 5 Sensitivity 91.74% Splice 3 Pred Count 13100.00 Splice 3 Ann Count 13102.00 Splice 3 Specificity 27.61% Splice 3 Sensitivity 93.25% Initial Count 4491.00 Ann Count 1547.00 Average Length 185.92 Median Length 100.00 Total Length 834985.00 Average Score 0.96 Total Score 4323.16 Correct Pred Count 1175.00 Correct Ann Count 1179.00 Correct Specificity 26.16% Correct Sensitivity 76.21% Overlap Pred Count 1357.00 Overlap Ann Count 1362.00 Overlap Specificity 30.22% Overlap Sensitivity 88.04% Overlap 80p Pred Count 1250.00 Overlap 80p Ann Count 1262.00 Overlap 80p Specificity 27.83% Overlap 80p Sensitivity 81.58% Splice 5 Pred Count 1192.00 Splice 5 Ann Count 1193.00 Splice 5 Specificity 26.54% Splice 5 Sensitivity 77.12% Splice 3 Pred Count 1339.00 Splice 3 Ann Count 1345.00 Splice 3 Specificity 29.82% Splice 3 Sensitivity 86.94% Internal Count 37301.00 Ann Count 10744.00 Average Length 145.74 Median Length 123.00 Total Length 5436162.00 Average Score 0.99 Total Score 37007.81 Correct Pred Count 10088.00 Correct Ann Count 10084.00 Correct Specificity 27.04% Correct Sensitivity 93.86% Overlap Pred Count 10398.00 Overlap Ann Count 10376.00 Overlap Specificity 27.88% Overlap Sensitivity 96.57% Overlap 80p Pred Count 10268.00 Overlap 80p Ann Count 10259.00 Overlap 80p Specificity 27.53% Overlap 80p Sensitivity 95.49% Splice 5 Pred Count 10210.00 Splice 5 Ann Count 10193.00 Splice 5 Specificity 27.37% Splice 5 Sensitivity 94.87% Splice 3 Pred Count 10271.00 Splice 3 Ann Count 10266.00 Splice 3 Specificity 27.54% Splice 3 Sensitivity 95.55% Terminal Count 4524.00 Ann Count 1549.00 Average Length 250.03 Median Length 139.00 Total Length 1131136.00 Average Score 0.97 Total Score 4393.76 Correct Pred Count 1293.00 Correct Ann Count 1292.00 Correct Specificity 28.58% Correct Sensitivity 83.41% Overlap Pred Count 1371.00 Overlap Ann Count 1386.00 Overlap Specificity 30.31% Overlap Sensitivity 89.48% Overlap 80p Pred Count 1347.00 Overlap 80p Ann Count 1343.00 Overlap 80p Specificity 29.77% Overlap 80p Sensitivity 86.70% Splice 5 Pred Count 1347.00 Splice 5 Ann Count 1361.00 Splice 5 Specificity 29.77% Splice 5 Sensitivity 87.86% Splice 3 Pred Count 1314.00 Splice 3 Ann Count 1314.00 Splice 3 Specificity 29.05% Splice 3 Sensitivity 84.83% Single Count 1135.00 Ann Count 210.00 Average Length 834.05 Median Length 777.00 Total Length 946644.00 Average Score 0.96 Total Score 1092.40 Correct Pred Count 134.00 Correct Ann Count 135.00 Correct Specificity 11.81% Correct Sensitivity 64.29% Overlap Pred Count 182.00 Overlap Ann Count 189.00 Overlap Specificity 16.04% Overlap Sensitivity 90.00% Overlap 80p Pred Count 179.00 Overlap 80p Ann Count 184.00 Overlap 80p Specificity 15.77% Overlap 80p Sensitivity 87.62% Splice 5 Pred Count 138.00 Splice 5 Ann Count 143.00 Splice 5 Specificity 12.16% Splice 5 Sensitivity 68.10% Splice 3 Pred Count 176.00 Splice 3 Ann Count 177.00 Splice 3 Specificity 15.51% Splice 3 Sensitivity 84.29% UTR3 Count 0.00 Ann Count 1736.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% UTR5 Count 0.00 Ann Count 2260.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Intron Count 41637.00 Ann Count 12250.00 Average Length 3441.36 Median Length 1290.00 Total Length 143287706.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 11121.00 Correct Ann Count 11121.00 Correct Specificity 26.71% Correct Sensitivity 90.78% Overlap Pred Count 11880.00 Overlap Ann Count 11993.00 Overlap Specificity 28.53% Overlap Sensitivity 97.90% Overlap 80p Pred Count 11337.00 Overlap 80p Ann Count 11343.00 Overlap 80p Specificity 27.23% Overlap 80p Sensitivity 92.60% Splice 5 Pred Count 11569.00 Splice 5 Ann Count 11582.00 Splice 5 Specificity 27.79% Splice 5 Sensitivity 94.55% Splice 3 Pred Count 11504.00 Splice 3 Ann Count 11516.00 Splice 3 Specificity 27.63% Splice 3 Sensitivity 94.01% InframeOptional Count 0.00 Ann Count 5.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 3.00 Correct Specificity 0.00% Correct Sensitivity 60.00% Overlap Pred Count 0.00 Overlap Ann Count 4.00 Overlap Specificity 0.00% Overlap Sensitivity 80.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 3.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 60.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 3.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 60.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 4.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 80.00% FrameshiftOptional Count 0.00 Ann Count 1.00 Average Length 0.00 Median Length 0.00 Total Length 0.00 Average Score 0.00 Total Score 0.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Overlap Pred Count 0.00 Overlap Ann Count 0.00 Overlap Specificity 0.00% Overlap Sensitivity 0.00% Overlap 80p Pred Count 0.00 Overlap 80p Ann Count 0.00 Overlap 80p Specificity 0.00% Overlap 80p Sensitivity 0.00% Splice 5 Pred Count 0.00 Splice 5 Ann Count 0.00 Splice 5 Specificity 0.00% Splice 5 Sensitivity 0.00% Splice 3 Pred Count 0.00 Splice 3 Ann Count 0.00 Splice 3 Specificity 0.00% Splice 3 Sensitivity 0.00% Nuc All Count 8348927.00 Ann Count 2283878.00 Correct Pred Count 2163046.00 Correct Ann Count 2163046.00 Correct Specificity 25.91% Correct Sensitivity 94.71% Initial Count 834985.00 Ann Count 252690.00 Correct Pred Count 223516.00 Correct Ann Count 228415.00 Correct Specificity 26.77% Correct Sensitivity 90.39% Internal Count 5436162.00 Ann Count 1476523.00 Correct Pred Count 1438188.00 Correct Ann Count 1423774.00 Correct Specificity 26.46% Correct Sensitivity 96.43% Terminal Count 1131136.00 Ann Count 350736.00 Correct Pred Count 318587.00 Correct Ann Count 327360.00 Correct Specificity 28.17% Correct Sensitivity 93.34% Single Count 946644.00 Ann Count 205179.00 Correct Pred Count 182755.00 Correct Ann Count 184747.00 Correct Specificity 19.31% Correct Sensitivity 90.04% UTR3 Count 0.00 Ann Count 915589.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% UTR5 Count 0.00 Ann Count 218372.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Intron Count 143287706.00 Ann Count 42691795.00 Correct Pred Count 34817489.00 Correct Ann Count 34817489.00 Correct Specificity 24.30% Correct Sensitivity 81.56% InframeOptional Count 0.00 Ann Count 444.00 Correct Pred Count 0.00 Correct Ann Count 333.00 Correct Specificity 0.00% Correct Sensitivity 75.00% FrameshiftOptional Count 0.00 Ann Count 79.00 Correct Pred Count 0.00 Correct Ann Count 0.00 Correct Specificity 0.00% Correct Sensitivity 0.00% Signal Splice Acceptor Count 41825.00 Ann Count 12293.00 Correct Pred Count 11557.00 Correct Ann Count 11554.00 Correct Specificity 27.63% Correct Sensitivity 93.99% Splice Donor Count 41792.00 Ann Count 12291.00 Correct Pred Count 11610.00 Correct Ann Count 11611.00 Correct Specificity 27.78% Correct Sensitivity 94.47% Start Codon Count 5626.00 Ann Count 1784.00 Correct Pred Count 1330.00 Correct Ann Count 1353.00 Correct Specificity 23.64% Correct Sensitivity 75.84% Stop Codon Count 5659.00 Ann Count 1785.00 Correct Pred Count 1490.00 Correct Ann Count 1510.00 Correct Specificity 26.33% Correct Sensitivity 84.59% Thu Oct 4 21:02:38 PDT 2007