Drosophila melanogaster (dm3) Predictions
Download Predictions (zipped GTF)
These are de novo predictions using the following informants (UCSC genome IDs):
- droSim1
- droSec1
- droYak2
- droEre2
- droAna3
- dp4
- droPer1
- droWil1
- droVir3
- droMoj3
- droGri2
- anoGam1
- apiMel3
- triCas2
The set of known genes was the Drosophila Gold Collection, containing 5935 genes and 5935 transcripts. CONTRAST predicts 13504 genes in this genome. The accuracy of these predictions was estimated using a holdout set. Please note the specificity measures are (possibly severe) underestimates, as all predictions not matching a known annotation were counted as incorrect.
| Gene Sensitivity | 74.63% |
| Gene Specificity | 30.86% |
| Exon Sensitivity | 90.05% |
| Exon Specificity | 33.31% |
| Nucleotide Sensitivity | 97.96% |
| Nucleotide Specificity | 36.02% |