Human (hg18) Predictions
Download Predictions (zipped GTF)
These are de novo predictions using the following informants (UCSC genome IDs):
- rheMac2
- mm8
- rn4
- oryCun1
- canFam2
- bosTau2
- dasNov1
- loxAfr1
- echTel1
- monDom4
- galGal2
The set of known genes was CCDS, containing 16008 genes and 18290 transcripts. CONTRAST predicts 26136 genes in this genome. The accuracy of these predictions was estimated using a holdout set. Please note the specificity measures are (possibly severe) underestimates, as all predictions not matching a known annotation were counted as incorrect.
| Gene Sensitivity | 56.65% |
| Gene Specificity | 37.87% |
| Exon Sensitivity | 93.53% |
| Exon Specificity | 66.13% |
| Nucleotide Sensitivity | 97.54% |
| Nucleotide Specificity | 66.35% |